Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 ISW1YBR245C 3390 nt1.47□□□□□ -2.17
CDC39P25655 BRR2YER172C 6492 nt1.47□□□□□ -2.17
CDC39P25655 ARF1YDL192W 546 nt1.47□□□□□ -2.17
CDC39P25655 MRPL6YHR147C 645 nt1.47□□□□□ -2.17
CDC39P25655 REX3YLR107W 1215 nt1.47□□□□□ -2.17
CDC39P25655 YHC1YLR298C 696 nt1.47□□□□□ -2.17
CDC39P25655 BAT1YHR208W 1182 nt1.46□□□□□ -2.18
CDC39P25655 TEX1YNL253W 1269 nt1.46□□□□□ -2.18
CDC39P25655 NUP100YKL068W 2880 nt1.46□□□□□ -2.18
CDC39P25655 LHS1YKL073W 2646 nt1.46□□□□□ -2.18
CDC39P25655 RTP1YMR185W 2946 nt1.46□□□□□ -2.18
CDC39P25655 TSC13YDL015C 933 nt1.46□□□□□ -2.18
CDC39P25655 YOL050CYOL050C 321 nt1.46□□□□□ -2.18
CDC39P25655 SSP2YOR242C 1116 nt1.46□□□□□ -2.18
CDC39P25655 MEI5YPL121C 669 nt1.46□□□□□ -2.18
CDC39P25655 APC2YLR127C 2562 nt1.45□□□□□ -2.18
CDC39P25655 VPS9YML097C 1356 nt1.45□□□□□ -2.18
CDC39P25655 PCL9YDL179W 915 nt1.45□□□□□ -2.18
CDC39P25655 YGL006W-AYGL006W-A 111 nt1.45□□□□□ -2.18
CDC39P25655 EPT1YHR123W 1176 nt1.45□□□□□ -2.18
CDC39P25655 IKI1YHR187W 930 nt1.45□□□□□ -2.18
CDC39P25655 YJL147CYJL147C 1149 nt1.45□□□□□ -2.18
CDC39P25655 YAL069WYAL069W 315 nt1.45□□□□□ -2.18
CDC39P25655 PRM6YML047C 1059 nt1.45□□□□□ -2.18
CDC39P25655 YNR034W-AYNR034W-A 297 nt1.45□□□□□ -2.18
CDC39P25655 DOT6YER088C 2013 nt1.45□□□□□ -2.18
CDC39P25655 SIR3YLR442C 2937 nt1.45□□□□□ -2.18
CDC39P25655 DIG2YDR480W 972 nt1.45□□□□□ -2.18
CDC39P25655 MRPL9YGR220C 810 nt1.45□□□□□ -2.18
CDC39P25655 RGM1YMR182C 636 nt1.45□□□□□ -2.18
CDC39P25655 YOR203WYOR203W 354 nt1.45□□□□□ -2.18
CDC39P25655 DCP2YNL118C 2913 nt1.44□□□□□ -2.18
CDC39P25655 MYO4YAL029C 4416 nt1.44□□□□□ -2.18
CDC39P25655 MIG2YGL209W 1149 nt1.44□□□□□ -2.18
CDC39P25655 YGR114CYGR114C 390 nt1.44□□□□□ -2.18
CDC39P25655 YJL169WYJL169W 369 nt1.44□□□□□ -2.18
CDC39P25655 BOS1YLR078C 735 nt1.44□□□□□ -2.18
CDC39P25655 YML094C-AYML094C-A 402 nt1.44□□□□□ -2.18
CDC39P25655 IGO1YNL157W 507 nt1.44□□□□□ -2.18
CDC39P25655 GRX7YBR014C 612 nt1.44□□□□□ -2.18
CDC39P25655 SPS4YOR313C 1017 nt1.44□□□□□ -2.18
CDC39P25655 CCL1YPR025C 1182 nt1.44□□□□□ -2.18
CDC39P25655 ARR2YPR200C 393 nt1.44□□□□□ -2.18
CDC39P25655 SBE22YHR103W 2559 nt1.44□□□□□ -2.18
CDC39P25655 ARP5YNL059C 2268 nt1.44□□□□□ -2.18
CDC39P25655 YGL039WYGL039W 1047 nt1.43□□□□□ -2.18
CDC39P25655 SFT1YKL006C-A 294 nt1.43□□□□□ -2.18
CDC39P25655 CTL1YMR180C 963 nt1.43□□□□□ -2.18
CDC39P25655 YMR306C-AYMR306C-A 390 nt1.43□□□□□ -2.18
CDC39P25655 HRT1YOL133W 366 nt1.43□□□□□ -2.18
CDC39P25655 FUS2YMR232W 2034 nt1.43□□□□□ -2.18
CDC39P25655 SDC1YDR469W 528 nt1.43□□□□□ -2.18
CDC39P25655 YER172C-AYER172C-A 381 nt1.43□□□□□ -2.18
CDC39P25655 MUB1YMR100W 1863 nt1.43□□□□□ -2.18
CDC39P25655 AIM36YMR157C 768 nt1.43□□□□□ -2.18
CDC39P25655 SIR4YDR227W 4077 nt1.42□□□□□ -2.18
CDC39P25655 YDL050CYDL050C 372 nt1.42□□□□□ -2.18
CDC39P25655 NCB2YDR397C 441 nt1.42□□□□□ -2.18
CDC39P25655 COBQ0105 1158 nt1.42□□□□□ -2.18
CDC39P25655 YFR010W-AYFR010W-A 189 nt1.42□□□□□ -2.18
CDC39P25655 YNL035CYNL035C 1170 nt1.42□□□□□ -2.18
CDC39P25655 YOR333CYOR333C 417 nt1.42□□□□□ -2.18
CDC39P25655 RLF2YPR018W 1821 nt1.42□□□□□ -2.18
CDC39P25655 YDR131CYDR131C 1671 nt1.42□□□□□ -2.18
CDC39P25655 YMR31YFR049W 372 nt1.42□□□□□ -2.18
CDC39P25655 CFT1YDR301W 4074 nt1.41□□□□□ -2.18
CDC39P25655 APC5YOR249C 2058 nt1.41□□□□□ -2.18
CDC39P25655 SEC28YIL076W 891 nt1.41□□□□□ -2.18
CDC39P25655 PAU8YAL068C 363 nt1.41□□□□□ -2.18
CDC39P25655 YNL162W-AYNL162W-A 219 nt1.41□□□□□ -2.18
CDC39P25655 PAU20YOL161C 363 nt1.41□□□□□ -2.18
CDC39P25655 CDC31YOR257W 486 nt1.41□□□□□ -2.18
CDC39P25655 HMT1YBR034C 1047 nt1.41□□□□□ -2.18
CDC39P25655 AIM4YBR194W 372 nt1.41□□□□□ -2.18
CDC39P25655 AFI1YOR129C 2682 nt1.41□□□□□ -2.18
CDC39P25655 UTP5YDR398W 1932 nt1.41□□□□□ -2.18
CDC39P25655 PLC1YPL268W 2610 nt1.4□□□□□ -2.18
CDC39P25655 FUS1YCL027W 1539 nt1.4□□□□□ -2.18
CDC39P25655 RMD5YDR255C 1266 nt1.4□□□□□ -2.18
CDC39P25655 YKL069WYKL069W 543 nt1.4□□□□□ -2.18
CDC39P25655 ECM13YBL043W 774 nt1.4□□□□□ -2.18
CDC39P25655 HEM4YOR278W 828 nt1.4□□□□□ -2.18
CDC39P25655 PRM4YPL156C 855 nt1.4□□□□□ -2.18
CDC39P25655 TOM1YDR457W 9807 nt1.4□□□□□ -2.19
CDC39P25655 RPL35BYDL136W 363 nt1.4□□□□□ -2.19
CDC39P25655 NRG1YDR043C 696 nt1.4□□□□□ -2.19
CDC39P25655 ADK1YDR226W 669 nt1.4□□□□□ -2.19
CDC39P25655 YJR071WYJR071W 369 nt1.4□□□□□ -2.19
CDC39P25655 CAP1YKL007W 807 nt1.4□□□□□ -2.19
CDC39P25655 FIG1YBR040W 897 nt1.4□□□□□ -2.19
CDC39P25655 CBP6YBR120C 489 nt1.4□□□□□ -2.19
CDC39P25655 SOK2YMR016C 2358 nt1.4□□□□□ -2.19
CDC39P25655 RRP6YOR001W 2202 nt1.4□□□□□ -2.19
CDC39P25655 BRE5YNR051C 1548 nt1.39□□□□□ -2.19
CDC39P25655 snR63snR63 255 nt1.39□□□□□ -2.19
CDC39P25655 CSM2YIL132C 642 nt1.39□□□□□ -2.19
CDC39P25655 YJL202CYJL202C 348 nt1.39□□□□□ -2.19
CDC39P25655 YNL276CYNL276C 396 nt1.39□□□□□ -2.19
CDC39P25655 YOR093CYOR093C 4947 nt1.39□□□□□ -2.19
CDC39P25655 TRM82YDR165W 1335 nt1.39□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 47.6 ms