Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
COL8A2P25067 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.53■□□□□ 0.4
COL8A2P25067 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COL8A2P25067 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.53■□□□□ 0.4
COL8A2P25067 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.53■□□□□ 0.4
COL8A2P25067 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
COL8A2P25067 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
COL8A2P25067 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL8A2P25067 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.53■□□□□ 0.4
COL8A2P25067 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL8A2P25067 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL8A2P25067 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL8A2P25067 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL8A2P25067 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
COL8A2P25067 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
COL8A2P25067 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.52■□□□□ 0.4
COL8A2P25067 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL8A2P25067 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
COL8A2P25067 BX276092.2-201ENST00000417668 665 ntBASIC17.52■□□□□ 0.4
COL8A2P25067 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.52■□□□□ 0.4
COL8A2P25067 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.52■□□□□ 0.4
COL8A2P25067 MIR4758-201ENST00000577688 71 ntBASIC17.52■□□□□ 0.4
COL8A2P25067 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
COL8A2P25067 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL8A2P25067 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.52■□□□□ 0.4
COL8A2P25067 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.52■□□□□ 0.4
COL8A2P25067 AC010980.2-201ENST00000587099 1412 ntBASIC17.52■□□□□ 0.4
COL8A2P25067 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.52■□□□□ 0.4
COL8A2P25067 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
COL8A2P25067 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.52■□□□□ 0.39
COL8A2P25067 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
COL8A2P25067 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL8A2P25067 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL8A2P25067 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.51■□□□□ 0.39
COL8A2P25067 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
COL8A2P25067 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.51■□□□□ 0.39
COL8A2P25067 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL8A2P25067 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.51■□□□□ 0.39
COL8A2P25067 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL8A2P25067 AC073210.2-201ENST00000430369 194 ntBASIC17.51■□□□□ 0.39
COL8A2P25067 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.51■□□□□ 0.39
COL8A2P25067 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 KRT18P6-201ENST00000555540 1265 ntBASIC17.51■□□□□ 0.39
COL8A2P25067 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.51■□□□□ 0.39
COL8A2P25067 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.51■□□□□ 0.39
COL8A2P25067 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.51■□□□□ 0.39
COL8A2P25067 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.51■□□□□ 0.39
COL8A2P25067 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.51■□□□□ 0.39
COL8A2P25067 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL8A2P25067 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL8A2P25067 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.5■□□□□ 0.39
COL8A2P25067 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.5■□□□□ 0.39
COL8A2P25067 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.5■□□□□ 0.39
COL8A2P25067 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL8A2P25067 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL8A2P25067 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
COL8A2P25067 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL8A2P25067 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL8A2P25067 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL8A2P25067 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.5■□□□□ 0.39
COL8A2P25067 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL8A2P25067 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL8A2P25067 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.5■□□□□ 0.39
COL8A2P25067 CD99P1-205ENST00000527459 561 ntBASIC17.5■□□□□ 0.39
COL8A2P25067 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.5■□□□□ 0.39
COL8A2P25067 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COL8A2P25067 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL8A2P25067 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COL8A2P25067 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
COL8A2P25067 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.49■□□□□ 0.39
COL8A2P25067 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL8A2P25067 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL8A2P25067 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL8A2P25067 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL8A2P25067 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.49■□□□□ 0.39
COL8A2P25067 CDV3P1-201ENST00000471403 739 ntBASIC17.49■□□□□ 0.39
COL8A2P25067 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms