Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SLC29A4P1-201ENST00000398760 971 ntBASIC20.91■□□□□ 0.94
XPAP23025 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
XPAP23025 CDV3P1-201ENST00000471403 739 ntBASIC20.91■□□□□ 0.94
XPAP23025 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.91■□□□□ 0.94
XPAP23025 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
XPAP23025 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.91■□□□□ 0.94
XPAP23025 AC105036.2-201ENST00000569468 176 ntBASIC20.91■□□□□ 0.94
XPAP23025 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
XPAP23025 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.91■□□□□ 0.94
XPAP23025 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.91■□□□□ 0.94
XPAP23025 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
XPAP23025 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
XPAP23025 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.9■□□□□ 0.94
XPAP23025 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
XPAP23025 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XPAP23025 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
XPAP23025 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.9■□□□□ 0.94
XPAP23025 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
XPAP23025 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
XPAP23025 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
XPAP23025 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.9■□□□□ 0.94
XPAP23025 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.9■□□□□ 0.94
XPAP23025 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.9■□□□□ 0.94
XPAP23025 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XPAP23025 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
XPAP23025 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
XPAP23025 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XPAP23025 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
XPAP23025 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XPAP23025 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XPAP23025 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
XPAP23025 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XPAP23025 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
XPAP23025 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.89■□□□□ 0.94
XPAP23025 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.89■□□□□ 0.94
XPAP23025 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
XPAP23025 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
XPAP23025 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.89■□□□□ 0.93
XPAP23025 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.89■□□□□ 0.93
XPAP23025 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.89■□□□□ 0.93
XPAP23025 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.89■□□□□ 0.93
XPAP23025 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.89■□□□□ 0.93
XPAP23025 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.89■□□□□ 0.93
XPAP23025 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
XPAP23025 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
XPAP23025 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.89■□□□□ 0.93
XPAP23025 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
XPAP23025 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
XPAP23025 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
XPAP23025 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
XPAP23025 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
XPAP23025 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
XPAP23025 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
XPAP23025 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.88■□□□□ 0.93
XPAP23025 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.88■□□□□ 0.93
XPAP23025 AC133552.2-202ENST00000575694 574 ntBASIC20.88■□□□□ 0.93
XPAP23025 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
XPAP23025 AC104771.1-201ENST00000603335 964 ntBASIC20.88■□□□□ 0.93
XPAP23025 OR10C1-204ENST00000622521 1039 ntBASIC20.88■□□□□ 0.93
XPAP23025 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
XPAP23025 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
XPAP23025 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
XPAP23025 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
XPAP23025 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
XPAP23025 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 AL355802.2-201ENST00000402069 882 ntBASIC20.87■□□□□ 0.93
XPAP23025 AL162412.1-201ENST00000567129 965 ntBASIC20.87■□□□□ 0.93
XPAP23025 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
XPAP23025 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.87■□□□□ 0.93
XPAP23025 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
XPAP23025 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.87■□□□□ 0.93
XPAP23025 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XPAP23025 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.86■□□□□ 0.93
XPAP23025 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
XPAP23025 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
XPAP23025 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.86■□□□□ 0.93
XPAP23025 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.86■□□□□ 0.93
XPAP23025 AC091799.1-201ENST00000422823 811 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms