Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
CAPN3P20807 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.91■□□□□ 0.78
CAPN3P20807 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CAPN3P20807 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.91■□□□□ 0.78
CAPN3P20807 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.91■□□□□ 0.78
CAPN3P20807 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CAPN3P20807 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CAPN3P20807 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.91■□□□□ 0.78
CAPN3P20807 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.91■□□□□ 0.78
CAPN3P20807 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN3P20807 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN3P20807 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 AC020907.5-201ENST00000624372 1936 ntBASIC19.91■□□□□ 0.78
CAPN3P20807 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN3P20807 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CAPN3P20807 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
CAPN3P20807 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.91■□□□□ 0.78
CAPN3P20807 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN3P20807 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN3P20807 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CAPN3P20807 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CAPN3P20807 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CAPN3P20807 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CAPN3P20807 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN3P20807 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.9■□□□□ 0.78
CAPN3P20807 AC008764.7-201ENST00000593779 1081 ntBASIC19.9■□□□□ 0.78
CAPN3P20807 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CAPN3P20807 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CAPN3P20807 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN3P20807 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CAPN3P20807 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CAPN3P20807 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CAPN3P20807 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CAPN3P20807 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CAPN3P20807 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN3P20807 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.89■□□□□ 0.77
CAPN3P20807 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CAPN3P20807 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CAPN3P20807 AC007952.6-201ENST00000573168 2673 ntBASIC19.89■□□□□ 0.77
CAPN3P20807 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.89■□□□□ 0.77
CAPN3P20807 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN3P20807 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
CAPN3P20807 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.89■□□□□ 0.77
CAPN3P20807 AC003957.1-201ENST00000625108 2673 ntBASIC19.89■□□□□ 0.77
CAPN3P20807 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN3P20807 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CAPN3P20807 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN3P20807 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN3P20807 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN3P20807 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CAPN3P20807 AC055733.4-201ENST00000638462 1354 ntBASIC19.88■□□□□ 0.77
CAPN3P20807 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.88■□□□□ 0.77
CAPN3P20807 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.88■□□□□ 0.77
CAPN3P20807 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CAPN3P20807 ID1-201ENST00000376105 1233 ntBASIC19.88■□□□□ 0.77
CAPN3P20807 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN3P20807 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.88■□□□□ 0.77
CAPN3P20807 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CAPN3P20807 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CAPN3P20807 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CAPN3P20807 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CAPN3P20807 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN3P20807 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN3P20807 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.87■□□□□ 0.77
CAPN3P20807 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms