Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PPP3CBP16298 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PPP3CBP16298 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.53■□□□□ 0.56
PPP3CBP16298 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PPP3CBP16298 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PPP3CBP16298 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PPP3CBP16298 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PPP3CBP16298 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 AC080038.3-201ENST00000623346 1952 ntBASIC18.52■□□□□ 0.56
PPP3CBP16298 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.52■□□□□ 0.56
PPP3CBP16298 POU5F1P4-201ENST00000413175 1085 ntBASIC18.52■□□□□ 0.56
PPP3CBP16298 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.52■□□□□ 0.56
PPP3CBP16298 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PPP3CBP16298 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PPP3CBP16298 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
PPP3CBP16298 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PPP3CBP16298 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PPP3CBP16298 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PPP3CBP16298 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.52■□□□□ 0.55
PPP3CBP16298 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PPP3CBP16298 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.51■□□□□ 0.55
PPP3CBP16298 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 AC013268.1-206ENST00000638368 961 ntBASIC18.51■□□□□ 0.55
PPP3CBP16298 AC112229.1-201ENST00000639295 961 ntBASIC18.51■□□□□ 0.55
PPP3CBP16298 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PPP3CBP16298 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.51■□□□□ 0.55
PPP3CBP16298 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PPP3CBP16298 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PPP3CBP16298 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.5■□□□□ 0.55
PPP3CBP16298 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PPP3CBP16298 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PPP3CBP16298 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PPP3CBP16298 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.49■□□□□ 0.55
PPP3CBP16298 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
PPP3CBP16298 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.49■□□□□ 0.55
PPP3CBP16298 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.49■□□□□ 0.55
PPP3CBP16298 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.49■□□□□ 0.55
PPP3CBP16298 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.49■□□□□ 0.55
PPP3CBP16298 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.49■□□□□ 0.55
PPP3CBP16298 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.49■□□□□ 0.55
PPP3CBP16298 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.49■□□□□ 0.55
PPP3CBP16298 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PPP3CBP16298 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PPP3CBP16298 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms