Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.76■□□□□ 0.91
TIMP2P16035 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP2P16035 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.76■□□□□ 0.91
TIMP2P16035 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.76■□□□□ 0.91
TIMP2P16035 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TIMP2P16035 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP2P16035 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP2P16035 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TIMP2P16035 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.75■□□□□ 0.91
TIMP2P16035 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.75■□□□□ 0.91
TIMP2P16035 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.75■□□□□ 0.91
TIMP2P16035 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TIMP2P16035 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.75■□□□□ 0.91
TIMP2P16035 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.75■□□□□ 0.91
TIMP2P16035 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.75■□□□□ 0.91
TIMP2P16035 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP2P16035 AC116050.2-201ENST00000612102 1779 ntBASIC20.74■□□□□ 0.91
TIMP2P16035 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TIMP2P16035 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TIMP2P16035 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.74■□□□□ 0.91
TIMP2P16035 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP2P16035 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP2P16035 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP2P16035 BX276092.2-201ENST00000417668 665 ntBASIC20.74■□□□□ 0.91
TIMP2P16035 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.74■□□□□ 0.91
TIMP2P16035 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.74■□□□□ 0.91
TIMP2P16035 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.74■□□□□ 0.91
TIMP2P16035 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.74■□□□□ 0.91
TIMP2P16035 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.74■□□□□ 0.91
TIMP2P16035 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.74■□□□□ 0.91
TIMP2P16035 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP2P16035 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP2P16035 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP2P16035 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP2P16035 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TIMP2P16035 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.73■□□□□ 0.91
TIMP2P16035 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP2P16035 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP2P16035 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TIMP2P16035 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TIMP2P16035 AL355472.2-201ENST00000422958 438 ntBASIC20.73■□□□□ 0.91
TIMP2P16035 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP2P16035 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP2P16035 AC098934.4-201ENST00000564127 592 ntBASIC20.73■□□□□ 0.91
TIMP2P16035 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TIMP2P16035 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP2P16035 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TIMP2P16035 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP2P16035 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.73■□□□□ 0.91
TIMP2P16035 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
TIMP2P16035 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TIMP2P16035 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 AL024507.2-201ENST00000606070 2574 ntBASIC20.72■□□□□ 0.91
TIMP2P16035 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.72■□□□□ 0.91
TIMP2P16035 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.72■□□□□ 0.91
TIMP2P16035 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.72■□□□□ 0.91
TIMP2P16035 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP2P16035 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.72■□□□□ 0.91
TIMP2P16035 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.72■□□□□ 0.91
TIMP2P16035 MIR4758-201ENST00000577688 71 ntBASIC20.72■□□□□ 0.91
TIMP2P16035 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.72■□□□□ 0.91
TIMP2P16035 AC100791.3-201ENST00000617619 330 ntBASIC20.72■□□□□ 0.91
TIMP2P16035 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TIMP2P16035 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP2P16035 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
TIMP2P16035 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.72■□□□□ 0.91
TIMP2P16035 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TIMP2P16035 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TIMP2P16035 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP2P16035 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TIMP2P16035 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP2P16035 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.71■□□□□ 0.91
TIMP2P16035 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP2P16035 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP2P16035 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP2P16035 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.71■□□□□ 0.91
TIMP2P16035 AC073210.2-201ENST00000430369 194 ntBASIC20.71■□□□□ 0.91
TIMP2P16035 AC069152.1-201ENST00000438030 544 ntBASIC20.71■□□□□ 0.91
TIMP2P16035 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.71■□□□□ 0.91
TIMP2P16035 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.71■□□□□ 0.91
TIMP2P16035 AC133041.1-202ENST00000642053 222 ntBASIC20.71■□□□□ 0.91
TIMP2P16035 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP2P16035 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms