Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.78■■□□□ 1.4
COL11A1P12107 AC233263.1-201ENST00000578059 224 ntBASIC23.78■■□□□ 1.4
COL11A1P12107 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
COL11A1P12107 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
COL11A1P12107 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.77■■□□□ 1.4
COL11A1P12107 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
COL11A1P12107 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.77■■□□□ 1.4
COL11A1P12107 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.77■■□□□ 1.4
COL11A1P12107 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.77■■□□□ 1.4
COL11A1P12107 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.77■■□□□ 1.4
COL11A1P12107 AL359736.2-201ENST00000621992 437 ntBASIC23.77■■□□□ 1.4
COL11A1P12107 AC073648.6-201ENST00000641589 218 ntBASIC23.77■■□□□ 1.4
COL11A1P12107 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A1P12107 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.76■■□□□ 1.39
COL11A1P12107 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.76■■□□□ 1.39
COL11A1P12107 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.76■■□□□ 1.39
COL11A1P12107 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A1P12107 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A1P12107 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A1P12107 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.76■■□□□ 1.39
COL11A1P12107 AL589743.5-201ENST00000616611 1050 ntBASIC23.76■■□□□ 1.39
COL11A1P12107 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.76■■□□□ 1.39
COL11A1P12107 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.76■■□□□ 1.39
COL11A1P12107 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A1P12107 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
COL11A1P12107 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.75■■□□□ 1.39
COL11A1P12107 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.75■■□□□ 1.39
COL11A1P12107 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.75■■□□□ 1.39
COL11A1P12107 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.75■■□□□ 1.39
COL11A1P12107 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.75■■□□□ 1.39
COL11A1P12107 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A1P12107 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
COL11A1P12107 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.75■■□□□ 1.39
COL11A1P12107 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A1P12107 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
COL11A1P12107 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.75■■□□□ 1.39
COL11A1P12107 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
COL11A1P12107 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A1P12107 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A1P12107 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.75■■□□□ 1.39
COL11A1P12107 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
COL11A1P12107 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A1P12107 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.75■■□□□ 1.39
COL11A1P12107 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.75■■□□□ 1.39
COL11A1P12107 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
COL11A1P12107 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.75■■□□□ 1.39
COL11A1P12107 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A1P12107 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.74■■□□□ 1.39
COL11A1P12107 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A1P12107 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A1P12107 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A1P12107 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
COL11A1P12107 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A1P12107 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.74■■□□□ 1.39
COL11A1P12107 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.74■■□□□ 1.39
COL11A1P12107 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
COL11A1P12107 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.74■■□□□ 1.39
COL11A1P12107 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A1P12107 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.74■■□□□ 1.39
COL11A1P12107 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.73■■□□□ 1.39
COL11A1P12107 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.73■■□□□ 1.39
COL11A1P12107 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.73■■□□□ 1.39
COL11A1P12107 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.73■■□□□ 1.39
COL11A1P12107 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.73■■□□□ 1.39
COL11A1P12107 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A1P12107 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.72■■□□□ 1.39
COL11A1P12107 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 KRT18P68-201ENST00000392293 1000 ntBASIC23.72■■□□□ 1.39
COL11A1P12107 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.72■■□□□ 1.39
COL11A1P12107 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.72■■□□□ 1.39
COL11A1P12107 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.72■■□□□ 1.39
COL11A1P12107 FAM197Y4-202ENST00000622692 608 ntBASIC23.72■■□□□ 1.39
COL11A1P12107 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A1P12107 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.72■■□□□ 1.39
COL11A1P12107 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms