Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.2■□□□□ 0.98
SRFP11831 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.2■□□□□ 0.98
SRFP11831 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.2■□□□□ 0.98
SRFP11831 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.2■□□□□ 0.98
SRFP11831 C2orf69P4-201ENST00000565394 541 ntBASIC21.2■□□□□ 0.98
SRFP11831 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SRFP11831 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRFP11831 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRFP11831 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRFP11831 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.19■□□□□ 0.98
SRFP11831 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.19■□□□□ 0.98
SRFP11831 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 AC087499.1-201ENST00000418141 1075 ntBASIC21.19■□□□□ 0.98
SRFP11831 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.19■□□□□ 0.98
SRFP11831 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.19■□□□□ 0.98
SRFP11831 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.19■□□□□ 0.98
SRFP11831 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SRFP11831 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.19■□□□□ 0.98
SRFP11831 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SRFP11831 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.19■□□□□ 0.98
SRFP11831 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRFP11831 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.18■□□□□ 0.98
SRFP11831 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SRFP11831 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.18■□□□□ 0.98
SRFP11831 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.18■□□□□ 0.98
SRFP11831 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.18■□□□□ 0.98
SRFP11831 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.18■□□□□ 0.98
SRFP11831 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 AC110285.5-201ENST00000611501 352 ntBASIC21.18■□□□□ 0.98
SRFP11831 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SRFP11831 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SRFP11831 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRFP11831 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.18■□□□□ 0.98
SRFP11831 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.18■□□□□ 0.98
SRFP11831 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SRFP11831 AC093323.1-202ENST00000635031 2045 ntBASIC21.17■□□□□ 0.98
SRFP11831 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFP11831 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRFP11831 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRFP11831 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.17■□□□□ 0.98
SRFP11831 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SRFP11831 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRFP11831 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.17■□□□□ 0.98
SRFP11831 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SRFP11831 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SRFP11831 AC097493.4-201ENST00000641197 219 ntBASIC21.17■□□□□ 0.98
SRFP11831 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFP11831 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFP11831 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFP11831 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFP11831 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SRFP11831 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRFP11831 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.16■□□□□ 0.98
SRFP11831 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRFP11831 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SRFP11831 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.16■□□□□ 0.98
SRFP11831 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.16■□□□□ 0.98
SRFP11831 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRFP11831 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRFP11831 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.16■□□□□ 0.98
SRFP11831 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.16■□□□□ 0.98
SRFP11831 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.16■□□□□ 0.98
SRFP11831 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRFP11831 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.16■□□□□ 0.98
SRFP11831 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRFP11831 AC120498.8-201ENST00000614275 531 ntBASIC21.16■□□□□ 0.98
SRFP11831 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRFP11831 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRFP11831 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SRFP11831 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.15■□□□□ 0.98
SRFP11831 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.15■□□□□ 0.98
SRFP11831 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SRFP11831 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.15■□□□□ 0.98
SRFP11831 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SRFP11831 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.15■□□□□ 0.98
SRFP11831 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.15■□□□□ 0.98
SRFP11831 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms