Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINGO3P0C6S8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
LINGO3P0C6S8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINGO3P0C6S8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.97■□□□□ 0.79
LINGO3P0C6S8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINGO3P0C6S8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LINGO3P0C6S8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LINGO3P0C6S8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 AP005212.1-201ENST00000581547 1997 ntBASIC19.96■□□□□ 0.79
LINGO3P0C6S8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINGO3P0C6S8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
LINGO3P0C6S8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 AC133561.4-201ENST00000566112 224 ntBASIC19.95■□□□□ 0.78
LINGO3P0C6S8 CA15P2-201ENST00000611168 834 ntBASIC19.95■□□□□ 0.78
LINGO3P0C6S8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINGO3P0C6S8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 TNXA-203ENST00000507684 2038 ntBASIC19.94■□□□□ 0.78
LINGO3P0C6S8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 AC010525.1-201ENST00000585559 441 ntBASIC19.94■□□□□ 0.78
LINGO3P0C6S8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LINGO3P0C6S8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 NEFHP1-201ENST00000412845 2629 ntBASIC19.93■□□□□ 0.78
LINGO3P0C6S8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 EDA-201ENST00000338901 1233 ntBASIC19.93■□□□□ 0.78
LINGO3P0C6S8 SLC47A1P1-202ENST00000449666 945 ntBASIC19.93■□□□□ 0.78
LINGO3P0C6S8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 AL031602.1-201ENST00000633169 911 ntBASIC19.93■□□□□ 0.78
LINGO3P0C6S8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LINGO3P0C6S8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 BX842568.3-201ENST00000418104 571 ntBASIC19.92■□□□□ 0.78
LINGO3P0C6S8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 AL031432.3-201ENST00000607698 485 ntBASIC19.92■□□□□ 0.78
LINGO3P0C6S8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 AC068587.7-201ENST00000641602 218 ntBASIC19.92■□□□□ 0.78
LINGO3P0C6S8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms