Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLTAP09496 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.67■■□□□ 1.22
CLTAP09496 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CLTAP09496 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CLTAP09496 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CLTAP09496 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.67■■□□□ 1.22
CLTAP09496 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTAP09496 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTAP09496 AC068338.2-201ENST00000563278 1430 ntBASIC22.66■■□□□ 1.22
CLTAP09496 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLTAP09496 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTAP09496 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.66■■□□□ 1.22
CLTAP09496 AL050303.2-201ENST00000619798 666 ntBASIC22.66■■□□□ 1.22
CLTAP09496 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.66■■□□□ 1.22
CLTAP09496 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTAP09496 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.66■■□□□ 1.22
CLTAP09496 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CLTAP09496 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.65■■□□□ 1.22
CLTAP09496 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.65■■□□□ 1.22
CLTAP09496 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.65■■□□□ 1.22
CLTAP09496 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.65■■□□□ 1.22
CLTAP09496 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.65■■□□□ 1.22
CLTAP09496 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.65■■□□□ 1.22
CLTAP09496 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTAP09496 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLTAP09496 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CLTAP09496 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLTAP09496 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.64■■□□□ 1.22
CLTAP09496 AL137060.1-201ENST00000618151 2648 ntBASIC22.64■■□□□ 1.22
CLTAP09496 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.64■■□□□ 1.22
CLTAP09496 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
CLTAP09496 NCF1B-203ENST00000435988 1254 ntBASIC22.64■■□□□ 1.21
CLTAP09496 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.64■■□□□ 1.21
CLTAP09496 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.64■■□□□ 1.21
CLTAP09496 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.64■■□□□ 1.21
CLTAP09496 AL591742.1-201ENST00000604433 565 ntBASIC22.64■■□□□ 1.21
CLTAP09496 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLTAP09496 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLTAP09496 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.63■■□□□ 1.21
CLTAP09496 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CLTAP09496 AC026310.3-201ENST00000625186 2373 ntBASIC22.63■■□□□ 1.21
CLTAP09496 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLTAP09496 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.63■■□□□ 1.21
CLTAP09496 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.63■■□□□ 1.21
CLTAP09496 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLTAP09496 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CLTAP09496 ID1-201ENST00000376105 1233 ntBASIC22.63■■□□□ 1.21
CLTAP09496 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLTAP09496 AL162412.1-201ENST00000567129 965 ntBASIC22.63■■□□□ 1.21
CLTAP09496 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.63■■□□□ 1.21
CLTAP09496 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.63■■□□□ 1.21
CLTAP09496 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.63■■□□□ 1.21
CLTAP09496 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLTAP09496 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLTAP09496 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLTAP09496 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLTAP09496 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLTAP09496 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLTAP09496 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.62■■□□□ 1.21
CLTAP09496 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLTAP09496 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.62■■□□□ 1.21
CLTAP09496 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.62■■□□□ 1.21
CLTAP09496 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLTAP09496 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLTAP09496 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.62■■□□□ 1.21
CLTAP09496 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLTAP09496 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLTAP09496 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLTAP09496 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CLTAP09496 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLTAP09496 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLTAP09496 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLTAP09496 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLTAP09496 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLTAP09496 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.61■■□□□ 1.21
CLTAP09496 AC091799.1-201ENST00000422823 811 ntBASIC22.61■■□□□ 1.21
CLTAP09496 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.61■■□□□ 1.21
CLTAP09496 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
CLTAP09496 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms