Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04436 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04436 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04436 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P04436 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.95■□□□□ 0.62
P04436 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.95■□□□□ 0.62
P04436 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.95■□□□□ 0.62
P04436 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.95■□□□□ 0.62
P04436 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 MIPEPP3-201ENST00000412105 444 ntBASIC18.95■□□□□ 0.62
P04436 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.95■□□□□ 0.62
P04436 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.95■□□□□ 0.62
P04436 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.95■□□□□ 0.62
P04436 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.95■□□□□ 0.62
P04436 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.95■□□□□ 0.62
P04436 AC133041.1-202ENST00000642053 222 ntBASIC18.95■□□□□ 0.62
P04436 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
P04436 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.95■□□□□ 0.62
P04436 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04436 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
P04436 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
P04436 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 AC010980.2-201ENST00000587099 1412 ntBASIC18.94■□□□□ 0.62
P04436 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.94■□□□□ 0.62
P04436 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.94■□□□□ 0.62
P04436 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.94■□□□□ 0.62
P04436 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.94■□□□□ 0.62
P04436 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.94■□□□□ 0.62
P04436 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04436 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.94■□□□□ 0.62
P04436 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
P04436 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
P04436 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
P04436 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.93■□□□□ 0.62
P04436 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.93■□□□□ 0.62
P04436 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 BX276092.2-201ENST00000417668 665 ntBASIC18.93■□□□□ 0.62
P04436 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
P04436 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.93■□□□□ 0.62
P04436 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.93■□□□□ 0.62
P04436 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
P04436 AC116050.2-201ENST00000612102 1779 ntBASIC18.93■□□□□ 0.62
P04436 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
P04436 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04436 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.92■□□□□ 0.62
P04436 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.92■□□□□ 0.62
P04436 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.92■□□□□ 0.62
P04436 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04436 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04436 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04436 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
P04436 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.92■□□□□ 0.62
P04436 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
P04436 AC069152.1-201ENST00000438030 544 ntBASIC18.92■□□□□ 0.62
P04436 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.92■□□□□ 0.62
P04436 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.92■□□□□ 0.62
P04436 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04436 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04436 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.91■□□□□ 0.62
P04436 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.91■□□□□ 0.62
P04436 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04436 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.91■□□□□ 0.62
P04436 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P04436 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P04436 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04436 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04436 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04436 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.9■□□□□ 0.62
P04436 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms