Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.56■■□□□ 1.04
LMNAP02545 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LMNAP02545 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LMNAP02545 AC009237.3-201ENST00000393279 1427 ntBASIC21.55■■□□□ 1.04
LMNAP02545 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LMNAP02545 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
LMNAP02545 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 CYP2T1P-201ENST00000432607 1285 ntBASIC21.55■■□□□ 1.04
LMNAP02545 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.55■■□□□ 1.04
LMNAP02545 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.55■■□□□ 1.04
LMNAP02545 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.55■■□□□ 1.04
LMNAP02545 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNAP02545 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LMNAP02545 OXCT2P1-201ENST00000447263 1535 ntBASIC21.55■■□□□ 1.04
LMNAP02545 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
LMNAP02545 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.54■■□□□ 1.04
LMNAP02545 UBE2SP1-201ENST00000450587 669 ntBASIC21.54■■□□□ 1.04
LMNAP02545 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.54■■□□□ 1.04
LMNAP02545 OR10C1-204ENST00000622521 1039 ntBASIC21.54■■□□□ 1.04
LMNAP02545 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNAP02545 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.54■■□□□ 1.04
LMNAP02545 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.53■■□□□ 1.04
LMNAP02545 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.53■■□□□ 1.04
LMNAP02545 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LMNAP02545 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
LMNAP02545 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.53■■□□□ 1.04
LMNAP02545 KRT18P20-201ENST00000548986 1279 ntBASIC21.53■■□□□ 1.04
LMNAP02545 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
LMNAP02545 AC008694.1-202ENST00000636953 945 ntBASIC21.53■■□□□ 1.04
LMNAP02545 AC068338.2-201ENST00000563278 1430 ntBASIC21.53■■□□□ 1.04
LMNAP02545 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LMNAP02545 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.53■■□□□ 1.04
LMNAP02545 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LMNAP02545 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LMNAP02545 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
LMNAP02545 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.52■■□□□ 1.04
LMNAP02545 MIR718-201ENST00000390190 70 ntBASIC21.52■■□□□ 1.04
LMNAP02545 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LMNAP02545 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.52■■□□□ 1.04
LMNAP02545 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.52■■□□□ 1.04
LMNAP02545 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.52■■□□□ 1.04
LMNAP02545 MYC-209ENST00000641252 345 ntBASIC21.52■■□□□ 1.04
LMNAP02545 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.52■■□□□ 1.04
LMNAP02545 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.52■■□□□ 1.04
LMNAP02545 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LMNAP02545 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.51■■□□□ 1.03
LMNAP02545 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.51■■□□□ 1.03
LMNAP02545 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LMNAP02545 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
LMNAP02545 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.51■■□□□ 1.03
LMNAP02545 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.51■■□□□ 1.03
LMNAP02545 AL512625.2-201ENST00000417533 625 ntBASIC21.51■■□□□ 1.03
LMNAP02545 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.51■■□□□ 1.03
LMNAP02545 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.51■■□□□ 1.03
LMNAP02545 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.51■■□□□ 1.03
LMNAP02545 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.51■■□□□ 1.03
LMNAP02545 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.51■■□□□ 1.03
LMNAP02545 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LMNAP02545 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LMNAP02545 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMNAP02545 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMNAP02545 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms