Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.35■□□□□ 0.37
SIX6O95475 AC129492.7-201ENST00000622992 756 ntBASIC17.35■□□□□ 0.37
SIX6O95475 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
SIX6O95475 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.35■□□□□ 0.37
SIX6O95475 TNXA-203ENST00000507684 2038 ntBASIC17.35■□□□□ 0.37
SIX6O95475 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SIX6O95475 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX6O95475 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SIX6O95475 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.34■□□□□ 0.37
SIX6O95475 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX6O95475 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX6O95475 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.34■□□□□ 0.37
SIX6O95475 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.34■□□□□ 0.37
SIX6O95475 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.34■□□□□ 0.37
SIX6O95475 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SIX6O95475 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.34■□□□□ 0.37
SIX6O95475 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX6O95475 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIX6O95475 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX6O95475 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX6O95475 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SIX6O95475 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SIX6O95475 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.33■□□□□ 0.37
SIX6O95475 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.33■□□□□ 0.37
SIX6O95475 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SIX6O95475 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 AC121338.2-201ENST00000622535 1744 ntBASIC17.33■□□□□ 0.37
SIX6O95475 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX6O95475 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SIX6O95475 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SIX6O95475 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SIX6O95475 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 AC139795.1-202ENST00000500444 432 ntBASIC17.33■□□□□ 0.36
SIX6O95475 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.33■□□□□ 0.36
SIX6O95475 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.33■□□□□ 0.36
SIX6O95475 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SIX6O95475 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SIX6O95475 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIX6O95475 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SIX6O95475 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.32■□□□□ 0.36
SIX6O95475 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.32■□□□□ 0.36
SIX6O95475 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 AC003102.1-202ENST00000563394 1796 ntBASIC17.32■□□□□ 0.36
SIX6O95475 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SIX6O95475 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SIX6O95475 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX6O95475 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.32■□□□□ 0.36
SIX6O95475 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SIX6O95475 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SIX6O95475 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SIX6O95475 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX6O95475 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX6O95475 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.31■□□□□ 0.36
SIX6O95475 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.31■□□□□ 0.36
SIX6O95475 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX6O95475 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX6O95475 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX6O95475 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SIX6O95475 MIR7108-201ENST00000614319 87 ntBASIC17.31■□□□□ 0.36
SIX6O95475 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX6O95475 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SIX6O95475 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX6O95475 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIX6O95475 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
SIX6O95475 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.31■□□□□ 0.36
SIX6O95475 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIX6O95475 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms