Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
USP1O94782 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.94■□□□□ 0.94
USP1O94782 MIR6084-201ENST00000622012 110 ntBASIC20.94■□□□□ 0.94
USP1O94782 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.94■□□□□ 0.94
USP1O94782 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.94■□□□□ 0.94
USP1O94782 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 AC061975.6-201ENST00000579045 1553 ntBASIC20.93■□□□□ 0.94
USP1O94782 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP1O94782 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.93■□□□□ 0.94
USP1O94782 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
USP1O94782 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.93■□□□□ 0.94
USP1O94782 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP1O94782 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
USP1O94782 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
USP1O94782 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
USP1O94782 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
USP1O94782 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.92■□□□□ 0.94
USP1O94782 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
USP1O94782 LINC01006-201ENST00000333319 2292 ntBASIC20.92■□□□□ 0.94
USP1O94782 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 AC079140.4-201ENST00000507448 529 ntBASIC20.92■□□□□ 0.94
USP1O94782 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.92■□□□□ 0.94
USP1O94782 KRT87P-202ENST00000534226 1464 ntBASIC20.92■□□□□ 0.94
USP1O94782 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
USP1O94782 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.92■□□□□ 0.94
USP1O94782 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
USP1O94782 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP1O94782 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
USP1O94782 AC027612.3-201ENST00000413684 1047 ntBASIC20.91■□□□□ 0.94
USP1O94782 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
USP1O94782 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.91■□□□□ 0.94
USP1O94782 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.91■□□□□ 0.94
USP1O94782 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP1O94782 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.9■□□□□ 0.94
USP1O94782 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
USP1O94782 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP1O94782 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
USP1O94782 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.9■□□□□ 0.94
USP1O94782 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.9■□□□□ 0.94
USP1O94782 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.9■□□□□ 0.94
USP1O94782 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.9■□□□□ 0.94
USP1O94782 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.9■□□□□ 0.94
USP1O94782 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.9■□□□□ 0.94
USP1O94782 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.9■□□□□ 0.94
USP1O94782 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP1O94782 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP1O94782 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.89■□□□□ 0.94
USP1O94782 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.89■□□□□ 0.94
USP1O94782 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP1O94782 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
USP1O94782 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
USP1O94782 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
USP1O94782 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP1O94782 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
USP1O94782 POU5F1P4-201ENST00000413175 1085 ntBASIC20.89■□□□□ 0.93
USP1O94782 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP1O94782 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.89■□□□□ 0.93
USP1O94782 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.89■□□□□ 0.93
USP1O94782 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.89■□□□□ 0.93
USP1O94782 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
USP1O94782 AC008175.2-201ENST00000612840 297 ntBASIC20.89■□□□□ 0.93
USP1O94782 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP1O94782 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP1O94782 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
USP1O94782 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP1O94782 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
USP1O94782 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
USP1O94782 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms