Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF253O75346 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF253O75346 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF253O75346 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
ZNF253O75346 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF253O75346 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF253O75346 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF253O75346 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF253O75346 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ZNF253O75346 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF253O75346 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF253O75346 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF253O75346 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF253O75346 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF253O75346 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 SERBP1P1-201ENST00000396021 1160 ntBASIC16.06■□□□□ 0.16
ZNF253O75346 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF253O75346 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ZNF253O75346 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF253O75346 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF253O75346 FEM1AP1-201ENST00000431297 1995 ntBASIC16.06■□□□□ 0.16
ZNF253O75346 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF253O75346 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF253O75346 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 AP006587.3-201ENST00000525742 1516 ntBASIC16.05■□□□□ 0.16
ZNF253O75346 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
ZNF253O75346 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.05■□□□□ 0.16
ZNF253O75346 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ZNF253O75346 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF253O75346 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
ZNF253O75346 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ZNF253O75346 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF253O75346 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF253O75346 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF253O75346 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF253O75346 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.04■□□□□ 0.16
ZNF253O75346 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF253O75346 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF253O75346 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.04■□□□□ 0.16
ZNF253O75346 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF253O75346 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF253O75346 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.04■□□□□ 0.16
ZNF253O75346 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ZNF253O75346 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ZNF253O75346 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF253O75346 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF253O75346 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF253O75346 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF253O75346 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF253O75346 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms