Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.57■■□□□ 1.04
OPHN1O60890 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
OPHN1O60890 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.56■■□□□ 1.04
OPHN1O60890 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.56■■□□□ 1.04
OPHN1O60890 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.56■■□□□ 1.04
OPHN1O60890 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.56■■□□□ 1.04
OPHN1O60890 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.56■■□□□ 1.04
OPHN1O60890 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.56■■□□□ 1.04
OPHN1O60890 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
OPHN1O60890 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
OPHN1O60890 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
OPHN1O60890 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.55■■□□□ 1.04
OPHN1O60890 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.55■■□□□ 1.04
OPHN1O60890 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
OPHN1O60890 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
OPHN1O60890 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.54■■□□□ 1.04
OPHN1O60890 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.54■■□□□ 1.04
OPHN1O60890 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
OPHN1O60890 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.54■■□□□ 1.04
OPHN1O60890 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.54■■□□□ 1.04
OPHN1O60890 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
OPHN1O60890 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.54■■□□□ 1.04
OPHN1O60890 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
OPHN1O60890 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.54■■□□□ 1.04
OPHN1O60890 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
OPHN1O60890 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.53■■□□□ 1.04
OPHN1O60890 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
OPHN1O60890 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
OPHN1O60890 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
OPHN1O60890 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
OPHN1O60890 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.53■■□□□ 1.04
OPHN1O60890 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.53■■□□□ 1.04
OPHN1O60890 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.53■■□□□ 1.04
OPHN1O60890 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.53■■□□□ 1.04
OPHN1O60890 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
OPHN1O60890 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
OPHN1O60890 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
OPHN1O60890 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
OPHN1O60890 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
OPHN1O60890 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.53■■□□□ 1.04
OPHN1O60890 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.52■■□□□ 1.04
OPHN1O60890 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.52■■□□□ 1.04
OPHN1O60890 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.52■■□□□ 1.04
OPHN1O60890 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.52■■□□□ 1.04
OPHN1O60890 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
OPHN1O60890 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
OPHN1O60890 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
OPHN1O60890 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.51■■□□□ 1.03
OPHN1O60890 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.51■■□□□ 1.03
OPHN1O60890 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
OPHN1O60890 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms