Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.86■■□□□ 1.09
CAPN9O14815 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.86■■□□□ 1.09
CAPN9O14815 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN9O14815 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.86■■□□□ 1.09
CAPN9O14815 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CAPN9O14815 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.85■■□□□ 1.09
CAPN9O14815 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.85■■□□□ 1.09
CAPN9O14815 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CAPN9O14815 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN9O14815 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.85■■□□□ 1.09
CAPN9O14815 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.84■■□□□ 1.09
CAPN9O14815 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.84■■□□□ 1.09
CAPN9O14815 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.84■■□□□ 1.09
CAPN9O14815 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 AC245052.3-201ENST00000450182 901 ntBASIC21.84■■□□□ 1.09
CAPN9O14815 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.84■■□□□ 1.09
CAPN9O14815 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.84■■□□□ 1.09
CAPN9O14815 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.84■■□□□ 1.09
CAPN9O14815 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.84■■□□□ 1.09
CAPN9O14815 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.84■■□□□ 1.09
CAPN9O14815 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.84■■□□□ 1.09
CAPN9O14815 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.84■■□□□ 1.09
CAPN9O14815 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CAPN9O14815 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN9O14815 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CAPN9O14815 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.83■■□□□ 1.09
CAPN9O14815 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
CAPN9O14815 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN9O14815 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN9O14815 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN9O14815 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN9O14815 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
CAPN9O14815 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.83■■□□□ 1.09
CAPN9O14815 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN9O14815 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN9O14815 MFSD11-216ENST00000590393 1141 ntBASIC21.83■■□□□ 1.09
CAPN9O14815 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.83■■□□□ 1.09
CAPN9O14815 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN9O14815 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN9O14815 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN9O14815 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN9O14815 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.82■■□□□ 1.08
CAPN9O14815 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN9O14815 AC010536.3-201ENST00000620306 533 ntBASIC21.82■■□□□ 1.08
CAPN9O14815 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CAPN9O14815 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CAPN9O14815 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CAPN9O14815 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN9O14815 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN9O14815 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN9O14815 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN9O14815 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN9O14815 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.81■■□□□ 1.08
CAPN9O14815 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN9O14815 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN9O14815 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.81■■□□□ 1.08
CAPN9O14815 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CAPN9O14815 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN9O14815 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.81■■□□□ 1.08
CAPN9O14815 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.81■■□□□ 1.08
CAPN9O14815 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CAPN9O14815 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN9O14815 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN9O14815 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.81■■□□□ 1.08
CAPN9O14815 AC026310.3-201ENST00000625186 2373 ntBASIC21.81■■□□□ 1.08
CAPN9O14815 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CAPN9O14815 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN9O14815 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms