Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC110285.5-201ENST00000611501 352 ntBASIC29.25■■■□□ 2.27
CHD2O14647 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC29.25■■■□□ 2.27
CHD2O14647 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
CHD2O14647 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC29.25■■■□□ 2.27
CHD2O14647 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHD2O14647 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHD2O14647 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
CHD2O14647 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC29.24■■■□□ 2.27
CHD2O14647 CD177P1-201ENST00000606252 935 ntBASIC29.24■■■□□ 2.27
CHD2O14647 AP001412.1-201ENST00000608405 714 ntBASIC29.24■■■□□ 2.27
CHD2O14647 AL353708.3-201ENST00000610272 989 ntBASIC29.24■■■□□ 2.27
CHD2O14647 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC29.24■■■□□ 2.27
CHD2O14647 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHD2O14647 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHD2O14647 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHD2O14647 GRAP-204ENST00000573099 846 ntTSL 3 BASIC29.24■■■□□ 2.27
CHD2O14647 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC29.24■■■□□ 2.27
CHD2O14647 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHD2O14647 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC29.24■■■□□ 2.27
CHD2O14647 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC29.24■■■□□ 2.27
CHD2O14647 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC29.23■■■□□ 2.27
CHD2O14647 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC29.23■■■□□ 2.27
CHD2O14647 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC29.23■■■□□ 2.27
CHD2O14647 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHD2O14647 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC29.23■■■□□ 2.27
CHD2O14647 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC29.23■■■□□ 2.27
CHD2O14647 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD2O14647 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD2O14647 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC29.23■■■□□ 2.27
CHD2O14647 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD2O14647 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHD2O14647 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHD2O14647 TMPOP1-202ENST00000424642 1267 ntBASIC29.22■■■□□ 2.27
CHD2O14647 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
CHD2O14647 C2orf69P4-201ENST00000565394 541 ntBASIC29.22■■■□□ 2.27
CHD2O14647 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC29.22■■■□□ 2.27
CHD2O14647 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC29.22■■■□□ 2.27
CHD2O14647 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHD2O14647 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHD2O14647 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHD2O14647 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
CHD2O14647 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC29.22■■■□□ 2.27
CHD2O14647 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC29.22■■■□□ 2.27
CHD2O14647 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHD2O14647 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC29.21■■■□□ 2.27
CHD2O14647 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC29.2■■■□□ 2.27
CHD2O14647 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CHD2O14647 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CHD2O14647 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC29.2■■■□□ 2.26
CHD2O14647 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHD2O14647 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CHD2O14647 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
CHD2O14647 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC29.2■■■□□ 2.26
CHD2O14647 SERP1-205ENST00000487153 657 ntTSL 4 BASIC29.2■■■□□ 2.26
CHD2O14647 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC29.2■■■□□ 2.26
CHD2O14647 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC29.19■■■□□ 2.26
CHD2O14647 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC29.19■■■□□ 2.26
CHD2O14647 GGT1-206ENST00000404223 952 ntTSL 2 BASIC29.19■■■□□ 2.26
CHD2O14647 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC29.19■■■□□ 2.26
CHD2O14647 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC29.19■■■□□ 2.26
CHD2O14647 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
CHD2O14647 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHD2O14647 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CHD2O14647 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
CHD2O14647 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC29.18■■■□□ 2.26
CHD2O14647 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC29.18■■■□□ 2.26
CHD2O14647 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CHD2O14647 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms