Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX39AO00148 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
DDX39AO00148 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX39AO00148 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.37■■□□□ 1.33
DDX39AO00148 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
DDX39AO00148 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX39AO00148 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
DDX39AO00148 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
DDX39AO00148 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
DDX39AO00148 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
DDX39AO00148 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX39AO00148 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
DDX39AO00148 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.36■■□□□ 1.33
DDX39AO00148 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.36■■□□□ 1.33
DDX39AO00148 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX39AO00148 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX39AO00148 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.36■■□□□ 1.33
DDX39AO00148 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX39AO00148 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.36■■□□□ 1.33
DDX39AO00148 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX39AO00148 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX39AO00148 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
DDX39AO00148 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
DDX39AO00148 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX39AO00148 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 CDV3P1-201ENST00000471403 739 ntBASIC23.35■■□□□ 1.33
DDX39AO00148 AC142086.2-201ENST00000569753 217 ntBASIC23.35■■□□□ 1.33
DDX39AO00148 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX39AO00148 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX39AO00148 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
DDX39AO00148 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
DDX39AO00148 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX39AO00148 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.34■■□□□ 1.33
DDX39AO00148 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
DDX39AO00148 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.34■■□□□ 1.33
DDX39AO00148 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
DDX39AO00148 MIPEPP3-201ENST00000412105 444 ntBASIC23.34■■□□□ 1.33
DDX39AO00148 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.34■■□□□ 1.33
DDX39AO00148 AL162412.1-201ENST00000567129 965 ntBASIC23.34■■□□□ 1.33
DDX39AO00148 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX39AO00148 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.34■■□□□ 1.33
DDX39AO00148 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX39AO00148 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX39AO00148 AC010980.2-201ENST00000587099 1412 ntBASIC23.33■■□□□ 1.33
DDX39AO00148 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX39AO00148 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX39AO00148 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX39AO00148 BX276092.2-201ENST00000417668 665 ntBASIC23.33■■□□□ 1.33
DDX39AO00148 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.33■■□□□ 1.33
DDX39AO00148 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX39AO00148 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX39AO00148 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX39AO00148 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
DDX39AO00148 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
DDX39AO00148 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.33■■□□□ 1.32
DDX39AO00148 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX39AO00148 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
DDX39AO00148 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
DDX39AO00148 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.32■■□□□ 1.32
DDX39AO00148 AL512625.2-201ENST00000417533 625 ntBASIC23.32■■□□□ 1.32
DDX39AO00148 AL355472.2-201ENST00000422958 438 ntBASIC23.32■■□□□ 1.32
DDX39AO00148 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.32■■□□□ 1.32
DDX39AO00148 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX39AO00148 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.32■■□□□ 1.32
DDX39AO00148 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX39AO00148 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
DDX39AO00148 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX39AO00148 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
DDX39AO00148 AL024507.2-201ENST00000606070 2574 ntBASIC23.31■■□□□ 1.32
DDX39AO00148 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
DDX39AO00148 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms