Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 YBX1P1-201ENST00000445822 960 ntBASIC16.68■□□□□ 0.26
SRRM4A7MD48 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 TERF1P2-201ENST00000583350 1212 ntBASIC16.68■□□□□ 0.26
SRRM4A7MD48 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM4A7MD48 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM4A7MD48 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM4A7MD48 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM4A7MD48 AC073314.1-201ENST00000568729 2216 ntBASIC16.68■□□□□ 0.26
SRRM4A7MD48 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SRRM4A7MD48 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SRRM4A7MD48 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SRRM4A7MD48 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.67■□□□□ 0.26
SRRM4A7MD48 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.67■□□□□ 0.26
SRRM4A7MD48 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.67■□□□□ 0.26
SRRM4A7MD48 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SRRM4A7MD48 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRRM4A7MD48 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 CCDC92B-201ENST00000575506 885 ntBASIC16.66■□□□□ 0.26
SRRM4A7MD48 AC104187.1-201ENST00000607510 612 ntBASIC16.66■□□□□ 0.26
SRRM4A7MD48 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SRRM4A7MD48 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRRM4A7MD48 AC011484.1-201ENST00000377652 1995 ntBASIC16.66■□□□□ 0.26
SRRM4A7MD48 AC007225.1-201ENST00000566331 1836 ntBASIC16.66■□□□□ 0.26
SRRM4A7MD48 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM4A7MD48 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM4A7MD48 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM4A7MD48 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 AC010141.2-201ENST00000452426 721 ntBASIC16.65■□□□□ 0.26
SRRM4A7MD48 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM4A7MD48 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM4A7MD48 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM4A7MD48 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.65■□□□□ 0.26
SRRM4A7MD48 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 AP005212.1-201ENST00000581547 1997 ntBASIC16.64■□□□□ 0.25
SRRM4A7MD48 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 KRT18P14-201ENST00000534205 1250 ntBASIC16.64■□□□□ 0.25
SRRM4A7MD48 SLC7A5P2-201ENST00000553010 536 ntBASIC16.64■□□□□ 0.25
SRRM4A7MD48 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 RARRES2P11-201ENST00000635158 484 ntBASIC16.64■□□□□ 0.25
SRRM4A7MD48 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms