Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPB13A6NJU9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.37■□□□□ 0.53
NPIPB13A6NJU9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 AC091799.1-201ENST00000422823 811 ntBASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB13A6NJU9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 NTF6G-201ENST00000591094 616 ntBASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 MYCNOS-205ENST00000641950 531 ntBASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB13A6NJU9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPB13A6NJU9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms