Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBV9S1A1TA0A576 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBV9S1A1TA0A576 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 AC053503.5-201ENST00000601508 636 ntBASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.89■□□□□ 0.93
TCRBV9S1A1TA0A576 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 AC106739.1-201ENST00000617035 715 ntBASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 AC011484.1-201ENST00000377652 1995 ntBASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 AC061975.6-201ENST00000579045 1553 ntBASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBV9S1A1TA0A576 AL121603.2-201ENST00000557373 2117 ntBASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 EDA-201ENST00000338901 1233 ntBASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 AL512408.1-201ENST00000569378 2000 ntBASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.87■□□□□ 0.93
TCRBV9S1A1TA0A576 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 AL162377.1-201ENST00000618844 1793 ntBASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 AFG3L1P-217ENST00000557444 2447 ntBASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TCRBV9S1A1TA0A576 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 RASA4CP-201ENST00000424092 1398 ntBASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 MIR939-201ENST00000401314 82 ntBASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 AP004607.4-201ENST00000530158 1459 ntBASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV9S1A1TA0A576 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms