Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.22■□□□□ 0.51
TRDV1A0A1B0GX56 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 AC116562.4-201ENST00000641316 2276 ntBASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRDV1A0A1B0GX56 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRDV1A0A1B0GX56 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRDV1A0A1B0GX56 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
TRDV1A0A1B0GX56 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRDV1A0A1B0GX56 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 MIR6724-1-201ENST00000616420 92 ntBASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 MIR6724-2-201ENST00000616483 92 ntBASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 MIR6724-4-201ENST00000617390 92 ntBASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 MIR6724-3-201ENST00000622482 92 ntBASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms