Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 EDA-201ENST00000338901 1233 ntBASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 AC106739.1-201ENST00000617035 715 ntBASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00959A0A1B0GUT2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 AC007225.1-201ENST00000566331 1836 ntBASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 AP001330.3-201ENST00000520123 633 ntBASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 AL355001.2-201ENST00000620617 1191 ntBASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00959A0A1B0GUT2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 RASA4CP-201ENST00000424092 1398 ntBASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 AC053503.5-201ENST00000601508 636 ntBASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00959A0A1B0GUT2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00959A0A1B0GUT2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms