Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 TERF1P5-201ENST00000477545 1207 ntBASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC011484.1-201ENST00000377652 1995 ntBASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC196A0A1B0GTZ2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 MFSD11-216ENST00000590393 1141 ntBASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 BID-214ENST00000617586 542 ntTSL 5 BASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CCDC196A0A1B0GTZ2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC091799.1-201ENST00000422823 811 ntBASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC116050.2-201ENST00000612102 1779 ntBASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC196A0A1B0GTZ2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC011767.1-201ENST00000617410 1153 ntBASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC013268.1-206ENST00000638368 961 ntBASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 AC112229.1-201ENST00000639295 961 ntBASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC196A0A1B0GTZ2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC196A0A1B0GTZ2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC196A0A1B0GTZ2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.44
CCDC196A0A1B0GTZ2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
CCDC196A0A1B0GTZ2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC196A0A1B0GTZ2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC196A0A1B0GTZ2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC196A0A1B0GTZ2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 AC007322.4-201ENST00000509611 723 ntBASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC196A0A1B0GTZ2 PLK5-205ENST00000642079 1969 ntBASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms