Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-1A0A0K0K1D8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRBV6-1A0A0K0K1D8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-1A0A0K0K1D8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 DUX4L19-201ENST00000557448 1267 ntBASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 MIR3621-201ENST00000580529 85 ntBASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AC011298.3-201ENST00000615796 283 ntBASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AC018445.3-201ENST00000624177 1945 ntBASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AC055733.4-201ENST00000638462 1354 ntBASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 KRT16P3-201ENST00000439127 1283 ntBASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AC009299.2-201ENST00000482477 511 ntBASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRBV6-1A0A0K0K1D8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SERBP1P1-201ENST00000396021 1160 ntBASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 AC112907.3-201ENST00000577781 2400 ntBASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-1A0A0K0K1D8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms