Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 AC243732.1-201ENST00000612648 864 ntBASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV2A0A0B4J234 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV2A0A0B4J234 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV2A0A0B4J234 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 KRT18P61-201ENST00000585825 1298 ntBASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 AL121603.2-201ENST00000557373 2117 ntBASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV2A0A0B4J234 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 AL049796.1-201ENST00000565336 1766 ntBASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV2A0A0B4J234 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 FEM1AP4-201ENST00000443167 1987 ntBASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 AL162430.1-201ENST00000480705 870 ntBASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 MYCNOS-205ENST00000641950 531 ntBASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV2A0A0B4J234 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms