Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 AL136967.2-201ENST00000623968 743 ntBASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 AL358852.1-201ENST00000623174 1268 ntBASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 AC121338.2-201ENST00000622535 1744 ntBASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV30A0A087WSZ9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 LINC01521-201ENST00000504184 1943 ntBASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 EEF1DP3-203ENST00000566025 782 ntBASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV30A0A087WSZ9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 AC008175.2-201ENST00000612840 297 ntBASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms