Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PPHLN1-224ENST00000613154 1863 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 SEZ6L2-209ENST00000617533 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 SH3TC2-215ENST00000515425 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 NDRG2-212ENST00000403829 1500 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AL138688.2-201ENST00000623873 1513 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 MARK2P11-201ENST00000518523 1670 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 NCF2-204ENST00000418089 2168 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 UNC119-205ENST00000484980 4189 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 NMT2-201ENST00000378150 2457 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 SEMA6A-201ENST00000257414 4256 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 FCAMR-201ENST00000324852 2605 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 SSX6-202ENST00000412590 1461 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 LINC00635-202ENST00000464359 2119 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 USP54-204ENST00000422491 2777 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 PKD2L2-206ENST00000508883 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 ZNF582-AS1-202ENST00000587979 1606 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 KCNMA1-240ENST00000638575 3720 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 KCNMA1-245ENST00000638759 3723 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 KCNMA1-264ENST00000639544 3711 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 ORC1-201ENST00000371566 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 ELP4-210ENST00000638482 3084 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 CCDC65-202ENST00000320516 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 LINC00598-207ENST00000616706 2088 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 DEFA4-201ENST00000297435 617 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 OR52J3-201ENST00000380370 936 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 TRAV29DV5-201ENST00000390458 469 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC009494.1-201ENST00000406090 455 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 KCNIP2-AS1-201ENST00000412353 850 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC018638.1-201ENST00000414464 330 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 GZMB-204ENST00000415355 923 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 SEM1-204ENST00000417009 350 ntTSL 3 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AP001596.1-203ENST00000421771 1078 ntTSL 3 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 Z99716.1-201ENST00000424613 515 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC245036.2-201ENST00000433549 287 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 RPL3P12-201ENST00000436852 1208 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 RUSC1-AS1-201ENST00000443642 679 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 HNRNPA1P57-202ENST00000452488 958 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AL390763.1-201ENST00000454492 346 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AL513314.1-201ENST00000455363 318 ntTSL 3 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 PRR13P1-201ENST00000456678 408 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC018638.2-201ENST00000471258 403 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 RN7SL400P-201ENST00000473634 296 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 RN7SL822P-201ENST00000475674 296 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 RN7SL294P-201ENST00000477271 295 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 RN7SL584P-201ENST00000492309 297 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 MARK2P6-201ENST00000494974 897 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC021127.1-201ENST00000503589 566 ntTSL 4 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC010768.3-201ENST00000525465 792 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 EIF1AD-202ENST00000525767 743 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC025030.1-201ENST00000548007 573 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC106788.1-202ENST00000548889 1212 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC025578.1-201ENST00000552027 543 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC090409.1-201ENST00000587754 735 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 HNRNPA1P52-201ENST00000599047 947 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC063977.1-201ENST00000600623 371 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC068888.1-205ENST00000607643 662 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC104113.1-201ENST00000607723 479 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC011899.3-201ENST00000608596 617 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 CBR3-AS1-208ENST00000608690 590 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 TRPC5OS-202ENST00000612026 1043 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AL669831.3-201ENST00000634833 906 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 CD9-201ENST00000009180 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 RPS6KA1-216ENST00000530003 3023 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 SP140L-202ENST00000396563 2397 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 KCNIP1-209ENST00000616807 1448 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 HSP90B3P-201ENST00000415545 1567 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 PRR23D2-201ENST00000528972 1587 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 PRR23D1-201ENST00000533250 1587 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC106028.3-201ENST00000562894 1736 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AL122035.2-201ENST00000609125 1870 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 LSG1-201ENST00000265245 3572 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 LINC01310-201ENST00000380981 4015 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 MTFR1-201ENST00000262146 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 ARHGAP25-202ENST00000409202 2945 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 AC099066.2-201ENST00000448264 1530 ntTSL 2 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 ASB9-203ENST00000380488 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 MAPK10-295ENST00000641274 2259 ntBASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 PEX11A-201ENST00000300056 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
NPIPA3F8WFD2 LRRC37A4P-202ENST00000581296 5372 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 CD302-201ENST00000259053 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 LINC01104-202ENST00000452354 3115 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 SLC4A1AP-201ENST00000326019 2959 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 Z98259.3-202ENST00000641860 2210 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 CES5A-201ENST00000290567 2084 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 HIVEP1-205ENST00000484210 1602 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 PPP1R11-202ENST00000376763 1464 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AL353795.3-201ENST00000624351 5702 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 RASGRP4-217ENST00000615439 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms