RNA–Protein interactions for RNA: ENST00000300056.7

PEX11A-201, Transcript of peroxisomal biogenesis factor 11 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX11A, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11A-201ENST00000300056 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
PEX11A-201ENST00000300056 SHROOM4Q9ULL8 1493 aa18.21■□□□□ 0.51
PEX11A-201ENST00000300056 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
PEX11A-201ENST00000300056 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
PEX11A-201ENST00000300056 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
PEX11A-201ENST00000300056 HRCP23327 699 aa17.71■□□□□ 0.43
PEX11A-201ENST00000300056 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
PEX11A-201ENST00000300056 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
PEX11A-201ENST00000300056 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
PEX11A-201ENST00000300056 PPARGC1BQ86YN6 1023 aaKnown RBP17.32■□□□□ 0.36
PEX11A-201ENST00000300056 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
PEX11A-201ENST00000300056 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
PEX11A-201ENST00000300056 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
PEX11A-201ENST00000300056 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
PEX11A-201ENST00000300056 ABCC9O60706 1549 aa16.94■□□□□ 0.3
PEX11A-201ENST00000300056 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
PEX11A-201ENST00000300056 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
PEX11A-201ENST00000300056 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
PEX11A-201ENST00000300056 RB1CC1Q8TDY2 1594 aa16.69■□□□□ 0.26
PEX11A-201ENST00000300056 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
PEX11A-201ENST00000300056 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
PEX11A-201ENST00000300056 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
PEX11A-201ENST00000300056 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
PEX11A-201ENST00000300056 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
PEX11A-201ENST00000300056 CECR2Q9BXF3 1484 aa16.41■□□□□ 0.22
PEX11A-201ENST00000300056 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
PEX11A-201ENST00000300056 WIZO95785 1651 aa16.31■□□□□ 0.2
PEX11A-201ENST00000300056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
PEX11A-201ENST00000300056 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
PEX11A-201ENST00000300056 NACADO15069 1562 aa16.26■□□□□ 0.19
PEX11A-201ENST00000300056 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
PEX11A-201ENST00000300056 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
PEX11A-201ENST00000300056 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
PEX11A-201ENST00000300056 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
PEX11A-201ENST00000300056 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
PEX11A-201ENST00000300056 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
PEX11A-201ENST00000300056 TTBK1Q5TCY1 1321 aaPredicted RBP16.11■□□□□ 0.17
PEX11A-201ENST00000300056 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
PEX11A-201ENST00000300056 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.17
PEX11A-201ENST00000300056 CEP162Q5TB80 1403 aa16.08■□□□□ 0.16
PEX11A-201ENST00000300056 GTF3C3Q9Y5Q9 886 aa16.07■□□□□ 0.16
PEX11A-201ENST00000300056 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
PEX11A-201ENST00000300056 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
PEX11A-201ENST00000300056 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
PEX11A-201ENST00000300056 SOGA1O94964 1423 aa16■□□□□ 0.15
PEX11A-201ENST00000300056 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
PEX11A-201ENST00000300056 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
PEX11A-201ENST00000300056 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
PEX11A-201ENST00000300056 EEA1Q15075 1411 aa15.92■□□□□ 0.14
PEX11A-201ENST00000300056 RUSC2Q8N2Y8 1516 aa15.91■□□□□ 0.14
PEX11A-201ENST00000300056 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
PEX11A-201ENST00000300056 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
PEX11A-201ENST00000300056 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
PEX11A-201ENST00000300056 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
PEX11A-201ENST00000300056 MYT1Q01538 1121 aa15.79■□□□□ 0.12
PEX11A-201ENST00000300056 MIER1Q8N108 512 aa15.76■□□□□ 0.11
PEX11A-201ENST00000300056 UNC13AQ9UPW8 1703 aa15.75■□□□□ 0.11
PEX11A-201ENST00000300056 HNRNPUL2Q1KMD3 747 aaKnown RBP15.74■□□□□ 0.11
PEX11A-201ENST00000300056 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
PEX11A-201ENST00000300056 KIF21BO75037 1637 aa15.72■□□□□ 0.11
PEX11A-201ENST00000300056 CLIP1P30622 1438 aa15.69■□□□□ 0.1
PEX11A-201ENST00000300056 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
PEX11A-201ENST00000300056 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
PEX11A-201ENST00000300056 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
PEX11A-201ENST00000300056 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
PEX11A-201ENST00000300056 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
PEX11A-201ENST00000300056 APLP2Q06481 763 aa15.55■□□□□ 0.08
PEX11A-201ENST00000300056 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
PEX11A-201ENST00000300056 RANGAP1P46060 587 aaPredicted RBP15.52■□□□□ 0.07
PEX11A-201ENST00000300056 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
PEX11A-201ENST00000300056 DHX57Q6P158 1386 aaKnown RBP15.5■□□□□ 0.07
PEX11A-201ENST00000300056 CLSPNQ9HAW4 1339 aa15.5■□□□□ 0.07
PEX11A-201ENST00000300056 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
PEX11A-201ENST00000300056 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
PEX11A-201ENST00000300056 ARAP1Q96P48 1450 aa15.43■□□□□ 0.06
PEX11A-201ENST00000300056 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
PEX11A-201ENST00000300056 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
PEX11A-201ENST00000300056 PRXQ9BXM0 1461 aa15.39■□□□□ 0.05
PEX11A-201ENST00000300056 KANK4Q5T7N3 995 aaPredicted RBP15.38■□□□□ 0.05
PEX11A-201ENST00000300056 BIVM-ERCC5R4GMW8 1640 aa15.37■□□□□ 0.05
PEX11A-201ENST00000300056 RRBP1Q9P2E9 1410 aaKnown RBP15.36■□□□□ 0.05
PEX11A-201ENST00000300056 CUX2O14529 1486 aa15.34■□□□□ 0.05
PEX11A-201ENST00000300056 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
PEX11A-201ENST00000300056 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
PEX11A-201ENST00000300056 CUX1P39880 1505 aa15.23■□□□□ 0.03
PEX11A-201ENST00000300056 ARHGAP35Q9NRY4 1499 aa15.23■□□□□ 0.03
PEX11A-201ENST00000300056 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
PEX11A-201ENST00000300056 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
PEX11A-201ENST00000300056 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
PEX11A-201ENST00000300056 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
PEX11A-201ENST00000300056 ITGAEP38570 1179 aa15.18■□□□□ 0.02
PEX11A-201ENST00000300056 TIAM1Q13009 1591 aa15.12■□□□□ 0.01
PEX11A-201ENST00000300056 ANP32EQ9BTT0 268 aa15.11■□□□□ 0.01
PEX11A-201ENST00000300056 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
PEX11A-201ENST00000300056 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
PEX11A-201ENST00000300056 MAP3K1Q13233 1512 aa15.1■□□□□ 0.01
PEX11A-201ENST00000300056 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
PEX11A-201ENST00000300056 BCANQ96GW7 911 aa15.08■□□□□ 0
PEX11A-201ENST00000300056 NCAPD3P42695 1498 aa15.07■□□□□ 0
PEX11A-201ENST00000300056 CFTRP13569 1480 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms