Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC009061.2-203ENST00000635000 1462 ntTSL 5 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 LARS2-201ENST00000265537 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 SLC25A14-214ENST00000545805 1650 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 DSN1-202ENST00000373740 1922 ntAPPRIS ALT2 TSL 3 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 RUNX1T1-204ENST00000422361 2450 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AL513220.1-201ENST00000641190 1326 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 VIPAS39-201ENST00000327028 2614 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC116553.3-201ENST00000624242 1800 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 TTLL3-221ENST00000455274 2848 ntTSL 2 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 GOSR2-213ENST00000638216 3574 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 IGLV3-19-201ENST00000390309 377 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC087491.1-201ENST00000398554 616 ntTSL 3 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 PA2G4P2-201ENST00000414718 1200 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 TUBB4BP3-201ENST00000437546 271 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 CSH1-203ENST00000453363 632 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AL135902.1-201ENST00000458017 384 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC092850.1-201ENST00000464655 1109 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 OR5AC4P-201ENST00000509306 919 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC233724.5-201ENST00000509526 598 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 GAPDHP70-201ENST00000515281 1045 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC073913.1-201ENST00000544240 912 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC004858.1-201ENST00000554078 242 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC009127.2-201ENST00000561979 426 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC009088.1-201ENST00000565152 833 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 LINC00511-204ENST00000577828 538 ntTSL 3 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 SPCS1-205ENST00000602728 832 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 MAGOH3P-201ENST00000605130 447 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 RN7SL428P-201ENST00000613848 247 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC007551.2-201ENST00000613889 389 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 RN7SL331P-201ENST00000618054 247 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 ING4-218ENST00000619641 1280 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 LINC01667-203ENST00000623933 668 ntTSL 2 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 FOXCUT-201ENST00000628509 333 ntTSL 3 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC135068.9-201ENST00000628927 355 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 PRC1-AS1-201ENST00000554388 1525 ntTSL 2 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 SCRN3-202ENST00000409673 1788 ntTSL 2 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AL354685.1-201ENST00000427866 1755 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 RNGTT-201ENST00000369475 1725 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC010595.1-201ENST00000507387 1453 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 SAMD4B-214ENST00000611159 3662 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 TMEM255A-203ENST00000371369 3425 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 MTMR7-208ENST00000521857 2158 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 TRIM43B-202ENST00000639673 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 AC138470.1-201ENST00000624638 1897 ntBASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 OR13A1-201ENST00000374401 2574 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
NPIPA3F8WFD2 DCTN2-209ENST00000548249 2061 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 OGDHL-203ENST00000432695 3383 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 ERICH6B-201ENST00000298738 2421 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC022336.3-201ENST00000624807 1986 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 ITGA7-206ENST00000553804 3935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 ACSM3-202ENST00000440284 1517 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 RBMS3-209ENST00000452462 1547 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AL359547.1-201ENST00000419168 2190 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 MIP-201ENST00000257979 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 UXS1-202ENST00000409032 1935 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC233702.10-201ENST00000426261 2780 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 RPL23-201ENST00000245857 588 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 DYNLT1-203ENST00000367089 726 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 TRBV6-5-201ENST00000390368 410 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 CALM2-202ENST00000409563 770 ntTSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 SNRPCP19-201ENST00000420809 460 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AL512288.2-201ENST00000426041 367 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LINC01803-201ENST00000438659 613 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 SLC8A1-AS1-206ENST00000439606 565 ntTSL 4 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC083939.1-201ENST00000445475 126 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LINC01280-201ENST00000449783 1184 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 PGAM4-201ENST00000458128 765 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms