Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 LINC00565-201ENST00000562710 2331 ntBASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 PRORSD1P-201ENST00000295112 541 ntBASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 ESRRAP1-201ENST00000400596 1257 ntBASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 GUSBP5-202ENST00000510805 1989 ntBASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G3Q9Y6M4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 CYP2T3P-201ENST00000601990 817 ntBASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G3Q9Y6M4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CSNK1G3Q9Y6M4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G3Q9Y6M4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G3Q9Y6M4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G3Q9Y6M4 AC026471.6-201ENST00000622954 1905 ntBASIC20.33■□□□□ 0.84
CSNK1G3Q9Y6M4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G3Q9Y6M4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 C11orf96-202ENST00000528572 1834 ntBASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G3Q9Y6M4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 AC010542.4-201ENST00000563151 1910 ntBASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 UNC93B5-201ENST00000530315 699 ntBASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms