Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 AL049796.1-201ENST00000565336 1766 ntBASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4B1Q9Y6B7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 AC126544.1-201ENST00000580842 1059 ntBASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 AC104564.3-201ENST00000582367 638 ntBASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4B1Q9Y6B7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 AC010525.1-201ENST00000585559 441 ntBASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4B1Q9Y6B7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 AP005435.1-201ENST00000529293 1178 ntBASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 AC068587.7-201ENST00000641602 218 ntBASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
AP4B1Q9Y6B7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.83■□□□□ 0.77
AP4B1Q9Y6B7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms