Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 C1QBPP2-201ENST00000528754 825 ntBASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 CYP21A1P-202ENST00000354927 1481 ntBASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 KRT17P3-201ENST00000420566 1262 ntBASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 RPPH1-201ENST00000516869 333 ntBASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 POM121L13P-201ENST00000422362 380 ntBASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 FAM197Y4-202ENST00000622692 608 ntBASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCN10AQ9Y5Y9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 SOX15-203ENST00000570788 1093 ntBASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.98■■□□□ 1.27
SCN10AQ9Y5Y9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SCN10AQ9Y5Y9 C9orf163-202ENST00000624034 2573 ntBASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCN10AQ9Y5Y9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
SCN10AQ9Y5Y9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
SCN10AQ9Y5Y9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
SCN10AQ9Y5Y9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
SCN10AQ9Y5Y9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
SCN10AQ9Y5Y9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
SCN10AQ9Y5Y9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SCN10AQ9Y5Y9 AC116050.2-201ENST00000612102 1779 ntBASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms