Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 AC233702.5-201ENST00000584107 538 ntBASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTCBQ9Y3I0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTCBQ9Y3I0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTCBQ9Y3I0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RTCBQ9Y3I0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.43■■□□□ 1.82
RTCBQ9Y3I0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 RPS2P55-201ENST00000397318 883 ntBASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 AC107956.1-201ENST00000494359 873 ntBASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 AC105020.6-201ENST00000621523 1217 ntBASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.42■■□□□ 1.82
RTCBQ9Y3I0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.41■■□□□ 1.82
RTCBQ9Y3I0 KRT17P2-201ENST00000300992 1314 ntBASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 TSPY7P-201ENST00000431358 1114 ntBASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 KRT18P21-201ENST00000515767 1272 ntBASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTCBQ9Y3I0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.39■■□□□ 1.82
RTCBQ9Y3I0 AC026471.6-201ENST00000622954 1905 ntBASIC26.39■■□□□ 1.81
RTCBQ9Y3I0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
RTCBQ9Y3I0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RTCBQ9Y3I0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
RTCBQ9Y3I0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RTCBQ9Y3I0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.39■■□□□ 1.81
RTCBQ9Y3I0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 MTDHP1-201ENST00000605323 784 ntBASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.38■■□□□ 1.81
RTCBQ9Y3I0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RTCBQ9Y3I0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms