Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 NEFHP1-201ENST00000412845 2629 ntBASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 AC009299.2-201ENST00000482477 511 ntBASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 AC099778.1-201ENST00000568593 1911 ntBASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRCH1Q9Y2L9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRCH1Q9Y2L9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 AL512408.1-201ENST00000569378 2000 ntBASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LRCH1Q9Y2L9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 KRT18P24-201ENST00000344739 1156 ntBASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 THA1P-201ENST00000590384 1145 ntBASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH1Q9Y2L9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 FP325331.1-202ENST00000623531 1380 ntBASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.68■□□□□ 0.74
LRCH1Q9Y2L9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms