Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 AC079834.2-201ENST00000609776 1949 ntBASIC19.65■□□□□ 0.74
LHX6Q9UPM6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 STK33P1-201ENST00000423835 1218 ntBASIC19.65■□□□□ 0.74
LHX6Q9UPM6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
LHX6Q9UPM6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 AL589935.2-201ENST00000616471 1231 ntBASIC19.64■□□□□ 0.73
LHX6Q9UPM6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LHX6Q9UPM6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.63■□□□□ 0.73
LHX6Q9UPM6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 AC092368.3-202ENST00000574180 1591 ntBASIC19.62■□□□□ 0.73
LHX6Q9UPM6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 AL121894.2-201ENST00000602977 491 ntBASIC19.62■□□□□ 0.73
LHX6Q9UPM6 AC120498.10-201ENST00000621827 505 ntBASIC19.62■□□□□ 0.73
LHX6Q9UPM6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LHX6Q9UPM6 DUSP8P5-201ENST00000422884 1815 ntBASIC19.62■□□□□ 0.73
LHX6Q9UPM6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 AL135905.2-201ENST00000584934 1404 ntBASIC19.61■□□□□ 0.73
LHX6Q9UPM6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 SOX15-203ENST00000570788 1093 ntBASIC19.61■□□□□ 0.73
LHX6Q9UPM6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LHX6Q9UPM6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms