Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 KRT18P10-201ENST00000388836 1287 ntBASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SMCO4Q9NRQ5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 AL032819.2-201ENST00000624543 2162 ntBASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 AC093503.3-201ENST00000624917 2352 ntBASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 C17orf82-201ENST00000623772 1530 ntBASIC16.35■□□□□ 0.21
SMCO4Q9NRQ5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 NOC2LP1-202ENST00000452600 2235 ntBASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMCO4Q9NRQ5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 AL162377.1-201ENST00000618844 1793 ntBASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.33■□□□□ 0.21
SMCO4Q9NRQ5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.33■□□□□ 0.2
SMCO4Q9NRQ5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms