Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.8■□□□□ 0.76
VCX3BQ9H321 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
VCX3BQ9H321 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VCX3BQ9H321 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.79■□□□□ 0.76
VCX3BQ9H321 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VCX3BQ9H321 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VCX3BQ9H321 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
VCX3BQ9H321 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.79■□□□□ 0.76
VCX3BQ9H321 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.79■□□□□ 0.76
VCX3BQ9H321 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3BQ9H321 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
VCX3BQ9H321 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VCX3BQ9H321 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.78■□□□□ 0.76
VCX3BQ9H321 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.78■□□□□ 0.76
VCX3BQ9H321 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3BQ9H321 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 PLK5-205ENST00000642079 1969 ntBASIC19.77■□□□□ 0.76
VCX3BQ9H321 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 AC079089.2-201ENST00000531211 1277 ntBASIC19.77■□□□□ 0.76
VCX3BQ9H321 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3BQ9H321 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
VCX3BQ9H321 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VCX3BQ9H321 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 OR7E47P-201ENST00000546390 1422 ntBASIC19.76■□□□□ 0.75
VCX3BQ9H321 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 SPCS2P3-201ENST00000500401 656 ntBASIC19.76■□□□□ 0.75
VCX3BQ9H321 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.76■□□□□ 0.75
VCX3BQ9H321 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3BQ9H321 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3BQ9H321 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
VCX3BQ9H321 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3BQ9H321 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3BQ9H321 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.75■□□□□ 0.75
VCX3BQ9H321 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3BQ9H321 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
VCX3BQ9H321 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms