Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
CDH23Q9H251 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDH23Q9H251 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.33■■□□□ 1.16
CDH23Q9H251 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.33■■□□□ 1.16
CDH23Q9H251 KRT18P57-201ENST00000443599 1254 ntBASIC22.32■■□□□ 1.16
CDH23Q9H251 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.32■■□□□ 1.16
CDH23Q9H251 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH23Q9H251 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDH23Q9H251 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.32■■□□□ 1.16
CDH23Q9H251 AC243732.1-201ENST00000612648 864 ntBASIC22.32■■□□□ 1.16
CDH23Q9H251 AL590326.2-201ENST00000625139 305 ntBASIC22.32■■□□□ 1.16
CDH23Q9H251 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH23Q9H251 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
CDH23Q9H251 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDH23Q9H251 AL135905.2-201ENST00000584934 1404 ntBASIC22.32■■□□□ 1.16
CDH23Q9H251 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH23Q9H251 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.32■■□□□ 1.16
CDH23Q9H251 AL121894.2-201ENST00000602977 491 ntBASIC22.31■■□□□ 1.16
CDH23Q9H251 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDH23Q9H251 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDH23Q9H251 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.31■■□□□ 1.16
CDH23Q9H251 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH23Q9H251 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH23Q9H251 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.31■■□□□ 1.16
CDH23Q9H251 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.31■■□□□ 1.16
CDH23Q9H251 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.31■■□□□ 1.16
CDH23Q9H251 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH23Q9H251 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH23Q9H251 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH23Q9H251 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH23Q9H251 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.3■■□□□ 1.16
CDH23Q9H251 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CDH23Q9H251 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.3■■□□□ 1.16
CDH23Q9H251 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.3■■□□□ 1.16
CDH23Q9H251 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CDH23Q9H251 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDH23Q9H251 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
CDH23Q9H251 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH23Q9H251 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDH23Q9H251 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH23Q9H251 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.3■■□□□ 1.16
CDH23Q9H251 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.3■■□□□ 1.16
CDH23Q9H251 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.3■■□□□ 1.16
CDH23Q9H251 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.3■■□□□ 1.16
CDH23Q9H251 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.3■■□□□ 1.16
CDH23Q9H251 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.3■■□□□ 1.16
CDH23Q9H251 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.3■■□□□ 1.16
CDH23Q9H251 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH23Q9H251 AC092068.2-201ENST00000590491 1708 ntBASIC22.29■■□□□ 1.16
CDH23Q9H251 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDH23Q9H251 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CDH23Q9H251 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.29■■□□□ 1.16
CDH23Q9H251 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.29■■□□□ 1.16
CDH23Q9H251 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.29■■□□□ 1.16
CDH23Q9H251 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.29■■□□□ 1.16
CDH23Q9H251 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.29■■□□□ 1.16
CDH23Q9H251 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH23Q9H251 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH23Q9H251 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.29■■□□□ 1.16
CDH23Q9H251 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDH23Q9H251 AP001412.1-201ENST00000608405 714 ntBASIC22.29■■□□□ 1.16
CDH23Q9H251 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH23Q9H251 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH23Q9H251 AC073508.3-201ENST00000619697 1419 ntBASIC22.28■■□□□ 1.16
CDH23Q9H251 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH23Q9H251 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH23Q9H251 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH23Q9H251 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH23Q9H251 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDH23Q9H251 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH23Q9H251 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CDH23Q9H251 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
CDH23Q9H251 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH23Q9H251 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH23Q9H251 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.28■■□□□ 1.16
CDH23Q9H251 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH23Q9H251 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.28■■□□□ 1.16
CDH23Q9H251 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDH23Q9H251 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDH23Q9H251 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
CDH23Q9H251 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.27■■□□□ 1.16
CDH23Q9H251 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.27■■□□□ 1.16
CDH23Q9H251 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH23Q9H251 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.27■■□□□ 1.16
CDH23Q9H251 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH23Q9H251 PRKY-204ENST00000533551 1019 ntBASIC22.27■■□□□ 1.16
CDH23Q9H251 AC026471.6-201ENST00000622954 1905 ntBASIC22.27■■□□□ 1.16
CDH23Q9H251 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH23Q9H251 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH23Q9H251 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.27■■□□□ 1.16
CDH23Q9H251 AC113410.3-201ENST00000623366 203 ntBASIC22.27■■□□□ 1.16
CDH23Q9H251 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.27■■□□□ 1.15
CDH23Q9H251 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CDH23Q9H251 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CDH23Q9H251 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CDH23Q9H251 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms