Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM2Q9C040 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
TRIM2Q9C040 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRIM2Q9C040 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM2Q9C040 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM2Q9C040 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM2Q9C040 KRT87P-202ENST00000534226 1464 ntBASIC19.08■□□□□ 0.64
TRIM2Q9C040 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM2Q9C040 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM2Q9C040 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM2Q9C040 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM2Q9C040 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM2Q9C040 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 AC008175.2-201ENST00000612840 297 ntBASIC19.07■□□□□ 0.64
TRIM2Q9C040 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM2Q9C040 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM2Q9C040 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.07■□□□□ 0.64
TRIM2Q9C040 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 POU5F1P4-201ENST00000413175 1085 ntBASIC19.06■□□□□ 0.64
TRIM2Q9C040 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM2Q9C040 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM2Q9C040 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 AC006128.1-201ENST00000624704 1661 ntBASIC19.05■□□□□ 0.64
TRIM2Q9C040 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 AC121338.2-201ENST00000622535 1744 ntBASIC19.05■□□□□ 0.64
TRIM2Q9C040 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 LINC02228-203ENST00000641970 1355 ntBASIC19.05■□□□□ 0.64
TRIM2Q9C040 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM2Q9C040 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM2Q9C040 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRIM2Q9C040 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
TRIM2Q9C040 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM2Q9C040 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRIM2Q9C040 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 AC034268.1-201ENST00000441047 882 ntBASIC19.04■□□□□ 0.64
TRIM2Q9C040 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM2Q9C040 AC061975.6-201ENST00000579045 1553 ntBASIC19.04■□□□□ 0.64
TRIM2Q9C040 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM2Q9C040 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRIM2Q9C040 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM2Q9C040 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM2Q9C040 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM2Q9C040 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRIM2Q9C040 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM2Q9C040 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM2Q9C040 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM2Q9C040 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM2Q9C040 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM2Q9C040 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM2Q9C040 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.03■□□□□ 0.64
TRIM2Q9C040 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms