Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 AC131281.2-201ENST00000520478 145 ntBASIC17.8■□□□□ 0.44
NICN1Q9BSH3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 AL121603.2-201ENST00000557373 2117 ntBASIC17.8■□□□□ 0.44
NICN1Q9BSH3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NICN1Q9BSH3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NICN1Q9BSH3 AC027702.1-201ENST00000563810 1770 ntBASIC17.79■□□□□ 0.44
NICN1Q9BSH3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 AC121338.2-201ENST00000622535 1744 ntBASIC17.78■□□□□ 0.44
NICN1Q9BSH3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NICN1Q9BSH3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NICN1Q9BSH3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NICN1Q9BSH3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.76■□□□□ 0.43
NICN1Q9BSH3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NICN1Q9BSH3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NICN1Q9BSH3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms