Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 TSPY26P-201ENST00000476365 1326 ntBASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 AC008764.7-201ENST00000593779 1081 ntBASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPPED1Q9BRF8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 AC099791.1-201ENST00000416440 715 ntBASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 AL162377.1-201ENST00000618844 1793 ntBASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
CPPED1Q9BRF8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPPED1Q9BRF8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 EEF1DP3-203ENST00000566025 782 ntBASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPPED1Q9BRF8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPPED1Q9BRF8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPPED1Q9BRF8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 AL512408.1-201ENST00000569378 2000 ntBASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 AC027682.1-201ENST00000562846 899 ntBASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 AC011484.1-201ENST00000377652 1995 ntBASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.51■□□□□ 0.71
CPPED1Q9BRF8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms