Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV9Q99603 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRGV9Q99603 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV9Q99603 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV9Q99603 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 AC099791.1-201ENST00000416440 715 ntBASIC16.2■□□□□ 0.18
TRGV9Q99603 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.2■□□□□ 0.18
TRGV9Q99603 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV9Q99603 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV9Q99603 TSPY26P-201ENST00000476365 1326 ntBASIC16.19■□□□□ 0.18
TRGV9Q99603 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRGV9Q99603 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.19■□□□□ 0.18
TRGV9Q99603 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.19■□□□□ 0.18
TRGV9Q99603 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRGV9Q99603 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.19■□□□□ 0.18
TRGV9Q99603 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
TRGV9Q99603 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.19■□□□□ 0.18
TRGV9Q99603 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.19■□□□□ 0.18
TRGV9Q99603 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.19■□□□□ 0.18
TRGV9Q99603 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.19■□□□□ 0.18
TRGV9Q99603 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.19■□□□□ 0.18
TRGV9Q99603 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV9Q99603 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.19■□□□□ 0.18
TRGV9Q99603 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRGV9Q99603 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.18■□□□□ 0.18
TRGV9Q99603 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV9Q99603 AC027702.1-201ENST00000563810 1770 ntBASIC16.18■□□□□ 0.18
TRGV9Q99603 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV9Q99603 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.18■□□□□ 0.18
TRGV9Q99603 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV9Q99603 AC020907.5-201ENST00000624372 1936 ntBASIC16.18■□□□□ 0.18
TRGV9Q99603 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRGV9Q99603 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV9Q99603 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV9Q99603 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.18■□□□□ 0.18
TRGV9Q99603 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRGV9Q99603 AC053503.5-201ENST00000601508 636 ntBASIC16.18■□□□□ 0.18
TRGV9Q99603 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV9Q99603 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV9Q99603 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRGV9Q99603 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.18■□□□□ 0.18
TRGV9Q99603 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.17■□□□□ 0.18
TRGV9Q99603 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRGV9Q99603 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRGV9Q99603 MIR572-201ENST00000384983 95 ntBASIC16.17■□□□□ 0.18
TRGV9Q99603 EEF1DP3-203ENST00000566025 782 ntBASIC16.17■□□□□ 0.18
TRGV9Q99603 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRGV9Q99603 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV9Q99603 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV9Q99603 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV9Q99603 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV9Q99603 AP004607.4-201ENST00000530158 1459 ntBASIC16.16■□□□□ 0.18
TRGV9Q99603 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV9Q99603 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV9Q99603 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV9Q99603 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV9Q99603 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV9Q99603 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV9Q99603 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV9Q99603 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRGV9Q99603 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRGV9Q99603 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV9Q99603 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV9Q99603 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV9Q99603 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV9Q99603 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms