Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDK5RAP1Q96SZ6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 FBXW4P1-201ENST00000426721 2239 ntBASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 AC073210.2-201ENST00000430369 194 ntBASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 MIR4758-201ENST00000577688 71 ntBASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 AC116050.2-201ENST00000612102 1779 ntBASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK5RAP1Q96SZ6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 AC093787.1-201ENST00000450396 207 ntBASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDK5RAP1Q96SZ6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 AC010980.2-201ENST00000587099 1412 ntBASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 AC133041.1-202ENST00000642053 222 ntBASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDK5RAP1Q96SZ6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CDK5RAP1Q96SZ6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDK5RAP1Q96SZ6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
CDK5RAP1Q96SZ6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDK5RAP1Q96SZ6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDK5RAP1Q96SZ6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.58■■□□□ 1.04
CDK5RAP1Q96SZ6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 MIPEPP3-201ENST00000412105 444 ntBASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK5RAP1Q96SZ6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms