Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 TERF1P1-201ENST00000311003 1181 ntBASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 WWOX-216ENST00000569818 525 ntBASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 AC091076.1-201ENST00000610741 619 ntBASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 AL358472.4-201ENST00000633140 710 ntBASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.92■□□□□ 0.78
CNTNAP3BQ96NU0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 AC239809.2-201ENST00000415381 517 ntBASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 MTDHP1-201ENST00000605323 784 ntBASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3BQ96NU0 HLA-L-211ENST00000482052 1765 ntBASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3BQ96NU0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 AC110285.5-201ENST00000611501 352 ntBASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3BQ96NU0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AL450487.1-201ENST00000426799 995 ntBASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 RARRES2P10-201ENST00000564312 460 ntBASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AC120498.10-201ENST00000621827 505 ntBASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms