Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PACRGQ96M98 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.75■□□□□ 0.11
PACRGQ96M98 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.75■□□□□ 0.11
PACRGQ96M98 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.75■□□□□ 0.11
PACRGQ96M98 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
PACRGQ96M98 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
PACRGQ96M98 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.75■□□□□ 0.11
PACRGQ96M98 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.75■□□□□ 0.11
PACRGQ96M98 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PACRGQ96M98 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PACRGQ96M98 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.74■□□□□ 0.11
PACRGQ96M98 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.74■□□□□ 0.11
PACRGQ96M98 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PACRGQ96M98 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.74■□□□□ 0.11
PACRGQ96M98 KRT18P10-201ENST00000388836 1287 ntBASIC15.74■□□□□ 0.11
PACRGQ96M98 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.74■□□□□ 0.11
PACRGQ96M98 AL022069.1-201ENST00000568025 1636 ntBASIC15.74■□□□□ 0.11
PACRGQ96M98 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PACRGQ96M98 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PACRGQ96M98 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.74■□□□□ 0.11
PACRGQ96M98 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.73■□□□□ 0.11
PACRGQ96M98 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.73■□□□□ 0.11
PACRGQ96M98 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PACRGQ96M98 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PACRGQ96M98 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PACRGQ96M98 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.73■□□□□ 0.11
PACRGQ96M98 CR559946.2-201ENST00000623684 991 ntBASIC15.73■□□□□ 0.11
PACRGQ96M98 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 AC093503.3-201ENST00000624917 2352 ntBASIC15.73■□□□□ 0.11
PACRGQ96M98 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.73■□□□□ 0.11
PACRGQ96M98 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.73■□□□□ 0.11
PACRGQ96M98 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.73■□□□□ 0.11
PACRGQ96M98 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
PACRGQ96M98 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PACRGQ96M98 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.72■□□□□ 0.11
PACRGQ96M98 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
PACRGQ96M98 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PACRGQ96M98 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.72■□□□□ 0.11
PACRGQ96M98 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PACRGQ96M98 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PACRGQ96M98 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.72■□□□□ 0.11
PACRGQ96M98 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.72■□□□□ 0.11
PACRGQ96M98 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.72■□□□□ 0.11
PACRGQ96M98 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PACRGQ96M98 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PACRGQ96M98 AL133373.2-201ENST00000623187 2828 ntBASIC15.72■□□□□ 0.11
PACRGQ96M98 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PACRGQ96M98 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.71■□□□□ 0.11
PACRGQ96M98 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PACRGQ96M98 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PACRGQ96M98 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PACRGQ96M98 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.71■□□□□ 0.11
PACRGQ96M98 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PACRGQ96M98 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms