Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ITCHQ96J02 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITCHQ96J02 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITCHQ96J02 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
ITCHQ96J02 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
ITCHQ96J02 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITCHQ96J02 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITCHQ96J02 AC073314.1-201ENST00000568729 2216 ntBASIC19.76■□□□□ 0.75
ITCHQ96J02 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITCHQ96J02 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITCHQ96J02 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.76■□□□□ 0.75
ITCHQ96J02 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITCHQ96J02 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ITCHQ96J02 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
ITCHQ96J02 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.75■□□□□ 0.75
ITCHQ96J02 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
ITCHQ96J02 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ITCHQ96J02 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.75■□□□□ 0.75
ITCHQ96J02 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.75■□□□□ 0.75
ITCHQ96J02 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
ITCHQ96J02 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
ITCHQ96J02 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.75■□□□□ 0.75
ITCHQ96J02 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.75■□□□□ 0.75
ITCHQ96J02 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITCHQ96J02 TSPY26P-201ENST00000476365 1326 ntBASIC19.75■□□□□ 0.75
ITCHQ96J02 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.74■□□□□ 0.75
ITCHQ96J02 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ITCHQ96J02 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ITCHQ96J02 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.74■□□□□ 0.75
ITCHQ96J02 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.74■□□□□ 0.75
ITCHQ96J02 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ITCHQ96J02 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITCHQ96J02 AC099791.1-201ENST00000416440 715 ntBASIC19.74■□□□□ 0.75
ITCHQ96J02 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.74■□□□□ 0.75
ITCHQ96J02 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.74■□□□□ 0.75
ITCHQ96J02 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
ITCHQ96J02 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ITCHQ96J02 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.74■□□□□ 0.75
ITCHQ96J02 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ITCHQ96J02 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.74■□□□□ 0.75
ITCHQ96J02 BX005040.4-201ENST00000637145 1518 ntBASIC19.74■□□□□ 0.75
ITCHQ96J02 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ITCHQ96J02 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITCHQ96J02 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITCHQ96J02 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.73■□□□□ 0.75
ITCHQ96J02 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ITCHQ96J02 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.73■□□□□ 0.75
ITCHQ96J02 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ITCHQ96J02 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.73■□□□□ 0.75
ITCHQ96J02 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.73■□□□□ 0.75
ITCHQ96J02 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.73■□□□□ 0.75
ITCHQ96J02 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ITCHQ96J02 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
ITCHQ96J02 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.73■□□□□ 0.75
ITCHQ96J02 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ITCHQ96J02 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.73■□□□□ 0.75
ITCHQ96J02 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.72■□□□□ 0.75
ITCHQ96J02 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ITCHQ96J02 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.72■□□□□ 0.75
ITCHQ96J02 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITCHQ96J02 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITCHQ96J02 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ITCHQ96J02 AC007225.1-201ENST00000566331 1836 ntBASIC19.72■□□□□ 0.75
ITCHQ96J02 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITCHQ96J02 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.72■□□□□ 0.75
ITCHQ96J02 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.72■□□□□ 0.75
ITCHQ96J02 AC027682.1-201ENST00000562846 899 ntBASIC19.72■□□□□ 0.75
ITCHQ96J02 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.72■□□□□ 0.75
ITCHQ96J02 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.72■□□□□ 0.75
ITCHQ96J02 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITCHQ96J02 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.72■□□□□ 0.75
ITCHQ96J02 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITCHQ96J02 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ITCHQ96J02 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ITCHQ96J02 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITCHQ96J02 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITCHQ96J02 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITCHQ96J02 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.71■□□□□ 0.75
ITCHQ96J02 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITCHQ96J02 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.71■□□□□ 0.75
ITCHQ96J02 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.71■□□□□ 0.75
ITCHQ96J02 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms