Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 AC034268.1-201ENST00000441047 882 ntBASIC18.01■□□□□ 0.47
SLC25A28Q96A46 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 AC027702.1-201ENST00000563810 1770 ntBASIC18.01■□□□□ 0.47
SLC25A28Q96A46 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC25A28Q96A46 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18■□□□□ 0.47
SLC25A28Q96A46 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18■□□□□ 0.47
SLC25A28Q96A46 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18■□□□□ 0.47
SLC25A28Q96A46 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18■□□□□ 0.47
SLC25A28Q96A46 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18■□□□□ 0.47
SLC25A28Q96A46 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SLC25A28Q96A46 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 AC121338.2-201ENST00000622535 1744 ntBASIC18■□□□□ 0.47
SLC25A28Q96A46 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC25A28Q96A46 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC25A28Q96A46 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC25A28Q96A46 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 SLC47A1P1-202ENST00000449666 945 ntBASIC17.99■□□□□ 0.47
SLC25A28Q96A46 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC25A28Q96A46 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 TSPY26P-201ENST00000476365 1326 ntBASIC17.98■□□□□ 0.47
SLC25A28Q96A46 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC25A28Q96A46 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 YBX1P1-201ENST00000445822 960 ntBASIC17.97■□□□□ 0.47
SLC25A28Q96A46 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC25A28Q96A46 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC25A28Q96A46 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SLC25A28Q96A46 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms