Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEM54Q969K7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM54Q969K7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
TMEM54Q969K7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.53
TMEM54Q969K7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TMEM54Q969K7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM54Q969K7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM54Q969K7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM54Q969K7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM54Q969K7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.33■□□□□ 0.52
TMEM54Q969K7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM54Q969K7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TMEM54Q969K7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TMEM54Q969K7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 AC011484.1-201ENST00000377652 1995 ntBASIC18.33■□□□□ 0.52
TMEM54Q969K7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM54Q969K7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
TMEM54Q969K7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM54Q969K7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM54Q969K7 AC006128.1-201ENST00000624704 1661 ntBASIC18.32■□□□□ 0.52
TMEM54Q969K7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM54Q969K7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM54Q969K7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM54Q969K7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TMEM54Q969K7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM54Q969K7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM54Q969K7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM54Q969K7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM54Q969K7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM54Q969K7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM54Q969K7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM54Q969K7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM54Q969K7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM54Q969K7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM54Q969K7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 AC091799.1-201ENST00000422823 811 ntBASIC18.31■□□□□ 0.52
TMEM54Q969K7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM54Q969K7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM54Q969K7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM54Q969K7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM54Q969K7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM54Q969K7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM54Q969K7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM54Q969K7 AC016769.1-201ENST00000409132 1010 ntBASIC18.29■□□□□ 0.52
TMEM54Q969K7 AC006015.1-201ENST00000429970 570 ntBASIC18.29■□□□□ 0.52
TMEM54Q969K7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM54Q969K7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 AC010536.3-201ENST00000620306 533 ntBASIC18.29■□□□□ 0.52
TMEM54Q969K7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM54Q969K7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM54Q969K7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
TMEM54Q969K7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 477 ms